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HepG2 — IGVFSM8265VEJP

released
Summary
multiplexed sample: Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 15 days; Homo sapiens (male) HepG2 cell line grown in DMEM without serum; ... and 10 more samples
Multiplexing Method
barcode based
Sources
Barcode Map
IGVFFI3959KBFR
Taxa
Homo sapiens
Aliases
ansuman-satpathy:multiplexed_sample_igvf3_10x4
Protocols
Attribution
Ansuman Satpathy, Stanford

Donors

3 items
Aliases
  • igvf:donor_of_WTC11
male
Homo sapiens
  • igvf:donor_of_H9
female
Homo sapiens
  • igvf:donor_of_HepG2
male
Homo sapiens

File Sets

4 items
lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
  • ansuman-satpathy:multiseq_igvf3_10x4
Ansuman Satpathy, Stanford
single-nucleus RNA sequencing assay (10x multiome with MULTI-seq)
  • ansuman-satpathy:snRNA-seq_igvf3_10x4
Ansuman Satpathy, Stanford
single-nucleus ATAC-seq (10x multiome with MULTI-seq)
  • ansuman-satpathy:snATAC-seq_igvf3_10x4
Ansuman Satpathy, Stanford
10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix
  • ansuman-satpathy:igvf3_analysis_set_10x4
Ansuman Satpathy, Stanford

Multiplexed Samples

12 items
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 15 days
InVitroSystem
Homo sapiens (male) HepG2 cell line grown in DMEM without serum
InVitroSystem
Homo sapiens (male) HepG2 cell line grown in DMEM with serum
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 14 days
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 6 days
InVitroSystem
Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 8 days
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 14 days

Institutional Certificates

3 items
No limitations
No limitations
No limitations