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IGVFDS9961QTUB

released
File Set Type
experimental data
Summary
ATAC-seq
Assay Term
bulk assay for transposase-accessible chromatin using sequencing
Sample Summaries
  • GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens treated with 4 μM GSK3 inhibition for 7 days
Protocols
Aliases
charles-gersbach:measurement-set-bulk-atac-chir4um-ipsc-cm-rep2

Sequencing Results (Illumina)

2 items
fastq
reads
R1
2
3.1 GB
Charles Gersbach, Duke
validated
fastq
reads
R2
2
3.2 GB
Charles Gersbach, Duke
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens treated with 4 μM GSK3 inhibition for 7 days

Donors

1 item
Accession
Aliases
Sex
Taxa
  • charles-gersbach:human-donor-WTC11
male
Homo sapiens

Control File Sets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
ATAC-seq
  • charles-gersbach:measurement-set-bulk-atac-control-ipsc-cm-rep2
Charles Gersbach, Duke

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
ATAC-seq: alignments
  • charles-gersbach:analysis-set-bulk-atac-count
Charles Gersbach, Duke

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke