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IGVFDS9931JAJO

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 584)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 1707
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R1
8352
Read 1
22V3MJLT3
484 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8320
Read 2, Barcode index
22TMH5LT3
1.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8352
Read 2, Barcode index
22V3MJLT3
682 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8320
Read 1
22TMH5LT3
1.3 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 584)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • ali-mortazavi:770_CASTJ_10F
  • buenrostro-bernstein:Donor 2072
female
Mus musculus

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 815
Jason Buenrostro, Broad