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IGVFDS9728TWXO

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)
Protocols
Aliases
bradley-bernstein:scATAC Lib 119
buenrostro-bernstein:scATAC Lib 119
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R2
263
Read 2, Barcode index
362 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
253
Read 2, Barcode index
362 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
253
Read 1
208 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
263
Read 1
208 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1503
  • buenrostro-bernstein:Donor 1503
female
Mus musculus

Related Multiome Datasets

5 items
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 128
  • buenrostro-bernstein:scRNA Lib 128
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 129
  • buenrostro-bernstein:scRNA Lib 129
Jason Buenrostro, Broad
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 118
  • buenrostro-bernstein:scATAC Lib 118
Jason Buenrostro, Broad
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 120
  • buenrostro-bernstein:scATAC Lib 120
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 127
  • buenrostro-bernstein:scRNA Lib 127
Jason Buenrostro, Broad