{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS9726WUJT/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS9726WUJT",
"aliases": [
"ali-mortazavi:011_67E_illumina"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000647](/sample-terms/NTR_0000647/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000647/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000750](/sample-terms/NTR_0000750/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000750/"
},
{
"category": "mismatched status",
"detail": "Released multiplexed sample [IGVFSM8757EOTF](/multiplexed-samples/IGVFSM8757EOTF/) has in progress subobject tabular file [IGVFFI5536TVIR](/tabular-files/IGVFFI5536TVIR/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/multiplexed-samples/IGVFSM8757EOTF/"
},
{
"category": "missing publication",
"detail": "Multiplexed sample [IGVFSM8757EOTF](/multiplexed-samples/IGVFSM8757EOTF/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/multiplexed-samples/IGVFSM8757EOTF/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000751](/sample-terms/NTR_0000751/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000751/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000646](/sample-terms/NTR_0000646/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000646/"
},
{
"category": "missing publication",
"detail": "Measurement set [IGVFDS9726WUJT](/measurement-sets/IGVFDS9726WUJT/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS9726WUJT/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS9726WUJT](/measurement-sets/IGVFDS9726WUJT/) has in progress subobject tabular file [IGVFFI2591OFQO](/tabular-files/IGVFFI2591OFQO/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS9726WUJT/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS9726WUJT](/measurement-sets/IGVFDS9726WUJT/) has in progress subobject tabular file [IGVFFI1138MCVX](/tabular-files/IGVFFI1138MCVX/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS9726WUJT/"
}
]
},
"award": {
"@id": "/awards/HG012077/",
"component": "mapping",
"contact_pi": {
"@id": "/users/2c33e192-e815-4384-a220-72a0992cbe24/",
"title": "Ali Mortazavi"
},
"title": "Center for Mouse Genomic Variation at Single Cell Resolution"
},
"control_for": [],
"creation_timestamp": "2023-10-14T20:41:07.732539+00:00",
"data_use_limitation_summaries": [
"no certificate"
],
"donors": [
{
"@id": "/rodent-donors/IGVFDO6607QZPA/",
"accession": "IGVFDO6607QZPA",
"aliases": [
"ali-mortazavi:050_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7610XXRR/",
"accession": "IGVFDO7610XXRR",
"aliases": [
"ali-mortazavi:072_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1744FDIX/",
"accession": "IGVFDO1744FDIX",
"aliases": [
"ali-mortazavi:036_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0813DZTW/",
"accession": "IGVFDO0813DZTW",
"aliases": [
"ali-mortazavi:069_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3762EAWT/",
"accession": "IGVFDO3762EAWT",
"aliases": [
"ali-mortazavi:076_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4788BIQB/",
"accession": "IGVFDO4788BIQB",
"aliases": [
"ali-mortazavi:020_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7957DMLJ/",
"accession": "IGVFDO7957DMLJ",
"aliases": [
"ali-mortazavi:033_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5085MJSP/",
"accession": "IGVFDO5085MJSP",
"aliases": [
"ali-mortazavi:048_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4725SNCJ/",
"accession": "IGVFDO4725SNCJ",
"aliases": [
"ali-mortazavi:017_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0026YRCR/",
"accession": "IGVFDO0026YRCR",
"aliases": [
"ali-mortazavi:018_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6124WGNO/",
"accession": "IGVFDO6124WGNO",
"aliases": [
"ali-mortazavi:042_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5810HOHC/",
"accession": "IGVFDO5810HOHC",
"aliases": [
"ali-mortazavi:064_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6219LVKW/",
"accession": "IGVFDO6219LVKW",
"aliases": [
"ali-mortazavi:032_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9560CEGZ/",
"accession": "IGVFDO9560CEGZ",
"aliases": [
"ali-mortazavi:061_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0696DMIA/",
"accession": "IGVFDO0696DMIA",
"aliases": [
"ali-mortazavi:057_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7951JDSP/",
"accession": "IGVFDO7951JDSP",
"aliases": [
"ali-mortazavi:026_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2292YGGE/",
"accession": "IGVFDO2292YGGE",
"aliases": [
"ali-mortazavi:049_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3603MEIO/",
"accession": "IGVFDO3603MEIO",
"aliases": [
"ali-mortazavi:084_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5737FRWD/",
"accession": "IGVFDO5737FRWD",
"aliases": [
"ali-mortazavi:081_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9199TPBC/",
"accession": "IGVFDO9199TPBC",
"aliases": [
"ali-mortazavi:071_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0430HQIU/",
"accession": "IGVFDO0430HQIU",
"aliases": [
"ali-mortazavi:041_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1643VEDI/",
"accession": "IGVFDO1643VEDI",
"aliases": [
"ali-mortazavi:019_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2645GUSC/",
"accession": "IGVFDO2645GUSC",
"aliases": [
"ali-mortazavi:060_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6066JIEJ/",
"accession": "IGVFDO6066JIEJ",
"aliases": [
"ali-mortazavi:043_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6614NNPY/",
"accession": "IGVFDO6614NNPY",
"aliases": [
"ali-mortazavi:089_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5872DFML/",
"accession": "IGVFDO5872DFML",
"aliases": [
"ali-mortazavi:094_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0681EHNP/",
"accession": "IGVFDO0681EHNP",
"aliases": [
"ali-mortazavi:052_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8904OIIT/",
"accession": "IGVFDO8904OIIT",
"aliases": [
"ali-mortazavi:044_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1477BPVO/",
"accession": "IGVFDO1477BPVO",
"aliases": [
"ali-mortazavi:088_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5502NJPS/",
"accession": "IGVFDO5502NJPS",
"aliases": [
"ali-mortazavi:038_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6141KSSQ/",
"accession": "IGVFDO6141KSSQ",
"aliases": [
"ali-mortazavi:024_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7007WBAX/",
"accession": "IGVFDO7007WBAX",
"aliases": [
"ali-mortazavi:016_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1452VDIT/",
"accession": "IGVFDO1452VDIT",
"aliases": [
"ali-mortazavi:035_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2831PZHE/",
"accession": "IGVFDO2831PZHE",
"aliases": [
"ali-mortazavi:077_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4469VYEZ/",
"accession": "IGVFDO4469VYEZ",
"aliases": [
"ali-mortazavi:073_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6112GRYR/",
"accession": "IGVFDO6112GRYR",
"aliases": [
"ali-mortazavi:059_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9142EUBJ/",
"accession": "IGVFDO9142EUBJ",
"aliases": [
"ali-mortazavi:096_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9340WGNV/",
"accession": "IGVFDO9340WGNV",
"aliases": [
"ali-mortazavi:037_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9374WXKK/",
"accession": "IGVFDO9374WXKK",
"aliases": [
"ali-mortazavi:028_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0624KKTV/",
"accession": "IGVFDO0624KKTV",
"aliases": [
"ali-mortazavi:030_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2301HIUQ/",
"accession": "IGVFDO2301HIUQ",
"aliases": [
"ali-mortazavi:067_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3436ZMLY/",
"accession": "IGVFDO3436ZMLY",
"aliases": [
"ali-mortazavi:091_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4546RHSG/",
"accession": "IGVFDO4546RHSG",
"aliases": [
"ali-mortazavi:027_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9890MXGN/",
"accession": "IGVFDO9890MXGN",
"aliases": [
"ali-mortazavi:068_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2517TXOT/",
"accession": "IGVFDO2517TXOT",
"aliases": [
"ali-mortazavi:092_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3534MDFF/",
"accession": "IGVFDO3534MDFF",
"aliases": [
"ali-mortazavi:046_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3655FKMR/",
"accession": "IGVFDO3655FKMR",
"aliases": [
"ali-mortazavi:025_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5539RLXJ/",
"accession": "IGVFDO5539RLXJ",
"aliases": [
"ali-mortazavi:029_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0853BCOL/",
"accession": "IGVFDO0853BCOL",
"aliases": [
"ali-mortazavi:058_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2319OUEC/",
"accession": "IGVFDO2319OUEC",
"aliases": [
"ali-mortazavi:045_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7062NBTQ/",
"accession": "IGVFDO7062NBTQ",
"aliases": [
"ali-mortazavi:079_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0751WQHI/",
"accession": "IGVFDO0751WQHI",
"aliases": [
"ali-mortazavi:080_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5258MBVH/",
"accession": "IGVFDO5258MBVH",
"aliases": [
"ali-mortazavi:040_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8276XXVT/",
"accession": "IGVFDO8276XXVT",
"aliases": [
"ali-mortazavi:074_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9510ILZG/",
"accession": "IGVFDO9510ILZG",
"aliases": [
"ali-mortazavi:053_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3662UKFW/",
"accession": "IGVFDO3662UKFW",
"aliases": [
"ali-mortazavi:087_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3207TERA/",
"accession": "IGVFDO3207TERA",
"aliases": [
"ali-mortazavi:086_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8322VYDU/",
"accession": "IGVFDO8322VYDU",
"aliases": [
"ali-mortazavi:093_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2106EEWB/",
"accession": "IGVFDO2106EEWB",
"aliases": [
"ali-mortazavi:078_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8698PVAJ/",
"accession": "IGVFDO8698PVAJ",
"aliases": [
"ali-mortazavi:034_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4707SGWM/",
"accession": "IGVFDO4707SGWM",
"aliases": [
"ali-mortazavi:051_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5177QEWF/",
"accession": "IGVFDO5177QEWF",
"aliases": [
"ali-mortazavi:063_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5183UZGS/",
"accession": "IGVFDO5183UZGS",
"aliases": [
"ali-mortazavi:021_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7255VZBN/",
"accession": "IGVFDO7255VZBN",
"aliases": [
"ali-mortazavi:062_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8152XDDC/",
"accession": "IGVFDO8152XDDC",
"aliases": [
"ali-mortazavi:090_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3640WUBU/",
"accession": "IGVFDO3640WUBU",
"aliases": [
"ali-mortazavi:066_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7254QNQZ/",
"accession": "IGVFDO7254QNQZ",
"aliases": [
"ali-mortazavi:031_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5523UFUN/",
"accession": "IGVFDO5523UFUN",
"aliases": [
"ali-mortazavi:070_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9202WGJZ/",
"accession": "IGVFDO9202WGJZ",
"aliases": [
"ali-mortazavi:085_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8958JQIY/",
"accession": "IGVFDO8958JQIY",
"aliases": [
"ali-mortazavi:047_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI3252ETYO/",
"accession": "IGVFFI3252ETYO",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:16:40.770646+00:00",
"file_format": "fastq",
"file_size": 13095629594,
"href": "/sequence-files/IGVFFI3252ETYO/@@download/IGVFFI3252ETYO.fastq.gz",
"md5sum": "d0d044ee3d06eed580c7e4ebdfe37b91",
"s3_uri": "s3://igvf-files/2023/10/15/073f13a2-61ab-4d4e-936a-32f465ca3b29/IGVFFI3252ETYO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B06_D_nova_N1_L004_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2577MOHX/",
"accession": "IGVFFI2577MOHX",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:22:16.317022+00:00",
"file_format": "fastq",
"file_size": 6749755261,
"href": "/sequence-files/IGVFFI2577MOHX/@@download/IGVFFI2577MOHX.fastq.gz",
"md5sum": "ab538275404973a70c5600df9fc324de",
"s3_uri": "s3://igvf-files/2023/10/15/774dd2ce-fd97-4976-a115-7036bd7409a0/IGVFFI2577MOHX.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B06_D_nova_N1_L004_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2437MXAC/",
"accession": "IGVFFI2437MXAC",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:50:08.025791+00:00",
"file_format": "fastq",
"file_size": 13372988145,
"href": "/sequence-files/IGVFFI2437MXAC/@@download/IGVFFI2437MXAC.fastq.gz",
"md5sum": "ffd55bdc84fd1c43c92b1ba5235c3942",
"s3_uri": "s3://igvf-files/2023/10/15/13930b81-86f1-49f8-bbe5-6adb6e7fbdf8/IGVFFI2437MXAC.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B06_D_nova_N1_L001_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9978YPRJ/",
"accession": "IGVFFI9978YPRJ",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:50:13.582914+00:00",
"file_format": "fastq",
"file_size": 12511953694,
"href": "/sequence-files/IGVFFI9978YPRJ/@@download/IGVFFI9978YPRJ.fastq.gz",
"md5sum": "115104c44f1f760dc082dec87c33bdaa",
"s3_uri": "s3://igvf-files/2023/10/15/88f4455e-f3be-4b30-80c2-b0fbd1f8bebd/IGVFFI9978YPRJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B06_D_nova_N2_L004_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1611BHRS/",
"accession": "IGVFFI1611BHRS",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:04:45.331715+00:00",
"file_format": "fastq",
"file_size": 6879152816,
"href": "/sequence-files/IGVFFI1611BHRS/@@download/IGVFFI1611BHRS.fastq.gz",
"md5sum": "c922a5e4f6142ca52d342ed9d6ed5a5d",
"s3_uri": "s3://igvf-files/2023/10/15/d5cce755-c723-4097-a3aa-383248ed3554/IGVFFI1611BHRS.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B06_D_nova_N1_L002_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1607FWXX/",
"accession": "IGVFFI1607FWXX",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:07:45.944290+00:00",
"file_format": "fastq",
"file_size": 13352676878,
"href": "/sequence-files/IGVFFI1607FWXX/@@download/IGVFFI1607FWXX.fastq.gz",
"md5sum": "c864059cf47951d719f90b95eff904d4",
"s3_uri": "s3://igvf-files/2023/10/15/bad92e1b-7d11-4286-9f4e-d396bb196793/IGVFFI1607FWXX.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B06_D_nova_N1_L003_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3572CIPW/",
"accession": "IGVFFI3572CIPW",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:42:00.771634+00:00",
"file_format": "fastq",
"file_size": 12543771273,
"href": "/sequence-files/IGVFFI3572CIPW/@@download/IGVFFI3572CIPW.fastq.gz",
"md5sum": "9ae7d27f723525093a4f42e40a319245",
"s3_uri": "s3://igvf-files/2023/10/15/74a4bf0e-5112-48a2-a8ec-3dc2c1c4c519/IGVFFI3572CIPW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B06_D_nova_N2_L003_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6117RDWF/",
"accession": "IGVFFI6117RDWF",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:47:26.510343+00:00",
"file_format": "fastq",
"file_size": 6423118654,
"href": "/sequence-files/IGVFFI6117RDWF/@@download/IGVFFI6117RDWF.fastq.gz",
"md5sum": "a3e68999d1ba8425c6a6f66b136f8eac",
"s3_uri": "s3://igvf-files/2023/10/15/359bebf6-a2d6-4e54-9842-9c76c131d630/IGVFFI6117RDWF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B06_D_nova_N2_L003_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6858VXBZ/",
"accession": "IGVFFI6858VXBZ",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:55:52.273133+00:00",
"file_format": "fastq",
"file_size": 6922343437,
"href": "/sequence-files/IGVFFI6858VXBZ/@@download/IGVFFI6858VXBZ.fastq.gz",
"md5sum": "09edcfdd82e202249fa9e0191fabbf44",
"s3_uri": "s3://igvf-files/2023/10/15/e945559a-71e6-4c26-ad79-fb141fcd2376/IGVFFI6858VXBZ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B06_D_nova_N1_L001_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1332HXZY/",
"accession": "IGVFFI1332HXZY",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:13:39.760319+00:00",
"file_format": "fastq",
"file_size": 6821735589,
"href": "/sequence-files/IGVFFI1332HXZY/@@download/IGVFFI1332HXZY.fastq.gz",
"md5sum": "70bbc939668db4c5608b85edb10497b9",
"s3_uri": "s3://igvf-files/2023/10/15/538125aa-d79e-4b01-8002-d63fdc59f2e9/IGVFFI1332HXZY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B06_D_nova_N1_L003_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3603XPSR/",
"accession": "IGVFFI3603XPSR",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:25:07.666759+00:00",
"file_format": "fastq",
"file_size": 12664977656,
"href": "/sequence-files/IGVFFI3603XPSR/@@download/IGVFFI3603XPSR.fastq.gz",
"md5sum": "fa0a5220ef4668a22d102642a70b1a47",
"s3_uri": "s3://igvf-files/2023/10/15/bdc954a3-932b-482b-a45f-478e1d1be5df/IGVFFI3603XPSR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B06_D_nova_N2_L001_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2858LAAT/",
"accession": "IGVFFI2858LAAT",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:55:36.584909+00:00",
"file_format": "fastq",
"file_size": 6405414734,
"href": "/sequence-files/IGVFFI2858LAAT/@@download/IGVFFI2858LAAT.fastq.gz",
"md5sum": "c0c45b6a57a9ddfdbf278d5c7d174f92",
"s3_uri": "s3://igvf-files/2023/10/15/7e6aa003-b10a-4097-b373-9acc3e548161/IGVFFI2858LAAT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B06_D_nova_N2_L004_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1284EGJC/",
"accession": "IGVFFI1284EGJC",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:39:01.856531+00:00",
"file_format": "fastq",
"file_size": 6539462148,
"href": "/sequence-files/IGVFFI1284EGJC/@@download/IGVFFI1284EGJC.fastq.gz",
"md5sum": "2c3d89ad86b3fad778b22bf8108acf60",
"s3_uri": "s3://igvf-files/2023/10/15/e5efe128-58f5-40cf-a38a-c4dcae08f3a6/IGVFFI1284EGJC.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B06_D_nova_N2_L002_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4631OLIO/",
"accession": "IGVFFI4631OLIO",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:59:01.610536+00:00",
"file_format": "fastq",
"file_size": 13347279362,
"href": "/sequence-files/IGVFFI4631OLIO/@@download/IGVFFI4631OLIO.fastq.gz",
"md5sum": "785c955d6ffb9a2d4ed7ab1542cb25ef",
"s3_uri": "s3://igvf-files/2023/10/15/72b341c1-0113-48d0-922f-cd0b73814b44/IGVFFI4631OLIO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B06_D_nova_N1_L002_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4963LZDT/",
"accession": "IGVFFI4963LZDT",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:30:28.617567+00:00",
"file_format": "fastq",
"file_size": 6533925057,
"href": "/sequence-files/IGVFFI4963LZDT/@@download/IGVFFI4963LZDT.fastq.gz",
"md5sum": "51bc0a7dd7f5a3c314c6d0cba6c602c7",
"s3_uri": "s3://igvf-files/2023/10/15/cc0135eb-b7b5-4d88-80af-2200e96091d5/IGVFFI4963LZDT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B06_D_nova_N2_L001_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5808DRIB/",
"accession": "IGVFFI5808DRIB",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T02:33:24.957490+00:00",
"file_format": "fastq",
"file_size": 12812599996,
"href": "/sequence-files/IGVFFI5808DRIB/@@download/IGVFFI5808DRIB.fastq.gz",
"md5sum": "e032796aac8c81057807f88ad47a7291",
"s3_uri": "s3://igvf-files/2023/10/15/9f9d254b-0472-4581-a95d-5b01987e325f/IGVFFI5808DRIB.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B06_D_nova_N2_L002_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI7364GELE/",
"accession": "IGVFFI7364GELE",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:18.440014+00:00",
"file_format": "yaml",
"file_size": 1350,
"href": "/configuration-files/IGVFFI7364GELE/@@download/IGVFFI7364GELE.yaml.gz",
"md5sum": "3a90068b4bfda7c1492966cd4cbb3155",
"s3_uri": "s3://igvf-files/2024/09/18/6ff1f3fe-29c5-433d-8074-e284724f056e/IGVFFI7364GELE.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI9945XFVV/",
"accession": "IGVFFI9945XFVV",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:22.208695+00:00",
"file_format": "yaml",
"file_size": 1351,
"href": "/configuration-files/IGVFFI9945XFVV/@@download/IGVFFI9945XFVV.yaml.gz",
"md5sum": "16738d8782a602f2aca44626d5f16e37",
"s3_uri": "s3://igvf-files/2024/09/18/40cba044-4a46-4197-a40c-c8b7b0d02882/IGVFFI9945XFVV.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI6872TIPV/",
"accession": "IGVFFI6872TIPV",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:13.308155+00:00",
"file_format": "yaml",
"file_size": 1352,
"href": "/configuration-files/IGVFFI6872TIPV/@@download/IGVFFI6872TIPV.yaml.gz",
"md5sum": "dc2b88f12998ad979bce8333d021ced4",
"s3_uri": "s3://igvf-files/2024/09/18/118be779-c8c9-4f26-ba4f-b2e6789b9928/IGVFFI6872TIPV.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI8897ZMUQ/",
"accession": "IGVFFI8897ZMUQ",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:14.575414+00:00",
"file_format": "yaml",
"file_size": 1351,
"href": "/configuration-files/IGVFFI8897ZMUQ/@@download/IGVFFI8897ZMUQ.yaml.gz",
"md5sum": "08a2b789a258cb9c67912f49578aadce",
"s3_uri": "s3://igvf-files/2024/09/18/8a872b90-0292-4df3-b48d-4c7a6fb62230/IGVFFI8897ZMUQ.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI3464CSME/",
"accession": "IGVFFI3464CSME",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:19.741791+00:00",
"file_format": "yaml",
"file_size": 1350,
"href": "/configuration-files/IGVFFI3464CSME/@@download/IGVFFI3464CSME.yaml.gz",
"md5sum": "34a04d3dbb6bbb326042a07b881d2769",
"s3_uri": "s3://igvf-files/2024/09/18/047b5c7e-3d35-4f09-acc3-c30f44a1b7b3/IGVFFI3464CSME.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI5357HLRC/",
"accession": "IGVFFI5357HLRC",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:20.942693+00:00",
"file_format": "yaml",
"file_size": 1349,
"href": "/configuration-files/IGVFFI5357HLRC/@@download/IGVFFI5357HLRC.yaml.gz",
"md5sum": "f2e293e5fe04b822bd1eb45a4b02cd7a",
"s3_uri": "s3://igvf-files/2024/09/18/47f2b6c2-d7cf-46b0-b5b8-ff5f9612649d/IGVFFI5357HLRC.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI7934WPDR/",
"accession": "IGVFFI7934WPDR",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:17.278818+00:00",
"file_format": "yaml",
"file_size": 1350,
"href": "/configuration-files/IGVFFI7934WPDR/@@download/IGVFFI7934WPDR.yaml.gz",
"md5sum": "cc14e6453a9531d54827bf031d244e7c",
"s3_uri": "s3://igvf-files/2024/09/18/530209a9-3c28-4db0-afdc-c7e6d3ab759c/IGVFFI7934WPDR.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI6680ZXWR/",
"accession": "IGVFFI6680ZXWR",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:16.001473+00:00",
"file_format": "yaml",
"file_size": 1352,
"href": "/configuration-files/IGVFFI6680ZXWR/@@download/IGVFFI6680ZXWR.yaml.gz",
"md5sum": "7e56f7bdf71789ac8500e10a0c1eb406",
"s3_uri": "s3://igvf-files/2024/09/18/38149e7d-1da7-4aad-bdec-9e73e9f1df1a/IGVFFI6680ZXWR.yaml.gz",
"status": "released",
"upload_status": "validated"
}
],
"input_for": [
"/analysis-sets/IGVFDS1790VYNE/"
],
"lab": {
"@id": "/labs/ali-mortazavi/",
"title": "Ali Mortazavi, UCI"
},
"notes": "Preferred_assay_titles enum Parse Split-seq has been renamed to be Parse SPLiT-seq.",
"onlist_files": [
"/tabular-files/IGVFFI2591OFQO/",
"/tabular-files/IGVFFI1138MCVX/"
],
"onlist_method": "multi",
"preferred_assay_title": "Parse SPLiT-seq",
"protocols": [
"https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-flash-froz-eq2lyj17rlx9/v1",
"https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-flash-froz-n2bvj3noplk5/v2",
"https://www.protocols.io/view/evercode-wt-mega-v2-2-1-8epv5xxrng1b/v1",
"https://www.protocols.io/view/evercode-single-index-pcr-5jyl82k9rl2w/v1"
],
"release_timestamp": "2025-04-19T01:36:47.667428+00:00",
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM8757EOTF/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM8757EOTF",
"aliases": [
"ali-mortazavi:subpool_011_67E"
],
"cellular_sub_pool": "011_67E",
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [],
"institutional_certificates": [],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/NTR_0000646/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "left cerebral cortex",
"term_name": "left cerebral cortex"
},
{
"@id": "/sample-terms/NTR_0000647/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "right cerebral cortex",
"term_name": "right cerebral cortex"
},
{
"@id": "/sample-terms/NTR_0000750/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "left hippocampal formation",
"term_name": "left hippocampal formation"
},
{
"@id": "/sample-terms/NTR_0000751/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "right hippocampal formation",
"term_name": "right hippocampal formation"
},
{
"@id": "/sample-terms/UBERON_0001388/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "gastrocnemius",
"term_name": "gastrocnemius"
}
],
"status": "released",
"summary": "multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus NZO/H1LtJ (male, 69 days) left hippocampal formation tissue; ... and 190 more samples",
"taxa": "Mus musculus",
"treatments": []
}
],
"schema_version": "26",
"sequencing_library_types": [
"mRNA enriched"
],
"status": "released",
"strand_specificity": "5 prime to 3 prime",
"submitted_by": {
"@id": "/users/ebd1025b-e3ab-4e51-bfcd-1415f278281a/",
"title": "Diane Trout"
},
"submitted_files_timestamp": "2023-10-15T01:50:08.025791+00:00",
"summary": "Parse SPLiT-seq",
"uuid": "c990f16a-9515-4c9b-94a9-26ed89a6e01c"
}