IGVFDS9719TLJG

{
    "@context": "/terms/",
    "@id": "/measurement-sets/IGVFDS9719TLJG/",
    "@type": [
        "MeasurementSet",
        "FileSet",
        "Item"
    ],
    "accession": "IGVFDS9719TLJG",
    "aliases": [
        "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD_AmpliconSequencing"
    ],
    "assay_term": {
        "@id": "/assay-terms/OBI_0003661/",
        "status": "released",
        "term_name": "in vitro CRISPR screen using flow cytometry"
    },
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "missing sequencing kit",
                "detail": "Measurement set [IGVFDS9719TLJG](/measurement-sets/IGVFDS9719TLJG/) has sequence file(s) [IGVFFI6515CXFG](/sequence-files/IGVFFI6515CXFG/), [IGVFFI3469ROBJ](/sequence-files/IGVFFI3469ROBJ/), [IGVFFI8967OETR](/sequence-files/IGVFFI8967OETR/), [IGVFFI5398AFVH](/sequence-files/IGVFFI5398AFVH/), [IGVFFI2878WPQO](/sequence-files/IGVFFI2878WPQO/), [IGVFFI1780VLLT](/sequence-files/IGVFFI1780VLLT/), [IGVFFI1071UCGG](/sequence-files/IGVFFI1071UCGG/), [IGVFFI2385AGWX](/sequence-files/IGVFFI2385AGWX/), [IGVFFI7900NWVW](/sequence-files/IGVFFI7900NWVW/), [IGVFFI3115KPXY](/sequence-files/IGVFFI3115KPXY/), [IGVFFI0382VPVJ](/sequence-files/IGVFFI0382VPVJ/), [IGVFFI6922DFYU](/sequence-files/IGVFFI6922DFYU/), [IGVFFI7308VLWN](/sequence-files/IGVFFI7308VLWN/), [IGVFFI0964THJW](/sequence-files/IGVFFI0964THJW/), [IGVFFI6075BHMZ](/sequence-files/IGVFFI6075BHMZ/), [IGVFFI3799NCCX](/sequence-files/IGVFFI3799NCCX/), [IGVFFI6663FKOJ](/sequence-files/IGVFFI6663FKOJ/), [IGVFFI8997KYJZ](/sequence-files/IGVFFI8997KYJZ/), [IGVFFI5218EJHS](/sequence-files/IGVFFI5218EJHS/), [IGVFFI2530KYTX](/sequence-files/IGVFFI2530KYTX/), [IGVFFI7261AWDM](/sequence-files/IGVFFI7261AWDM/), [IGVFFI5931ZGLQ](/sequence-files/IGVFFI5931ZGLQ/), [IGVFFI7261IAWJ](/sequence-files/IGVFFI7261IAWJ/), [IGVFFI8275GHLE](/sequence-files/IGVFFI8275GHLE/), [IGVFFI2065UBFV](/sequence-files/IGVFFI2065UBFV/), [IGVFFI4268ETMY](/sequence-files/IGVFFI4268ETMY/), [IGVFFI0239JATF](/sequence-files/IGVFFI0239JATF/), [IGVFFI3799QOHU](/sequence-files/IGVFFI3799QOHU/), [IGVFFI1366CYMV](/sequence-files/IGVFFI1366CYMV/), [IGVFFI7492UEXV](/sequence-files/IGVFFI7492UEXV/), [IGVFFI6587XSFM](/sequence-files/IGVFFI6587XSFM/), [IGVFFI5325KJIB](/sequence-files/IGVFFI5325KJIB/), [IGVFFI6940SYHQ](/sequence-files/IGVFFI6940SYHQ/), [IGVFFI5765ASKS](/sequence-files/IGVFFI5765ASKS/), [IGVFFI7511CYIV](/sequence-files/IGVFFI7511CYIV/), [IGVFFI8840JZVO](/sequence-files/IGVFFI8840JZVO/), [IGVFFI6026PRJQ](/sequence-files/IGVFFI6026PRJQ/), [IGVFFI2491OWOW](/sequence-files/IGVFFI2491OWOW/), [IGVFFI3746CBBD](/sequence-files/IGVFFI3746CBBD/), [IGVFFI0732SWOQ](/sequence-files/IGVFFI0732SWOQ/), [IGVFFI1285WULZ](/sequence-files/IGVFFI1285WULZ/), [IGVFFI6778GBHQ](/sequence-files/IGVFFI6778GBHQ/), [IGVFFI1603QEIE](/sequence-files/IGVFFI1603QEIE/), [IGVFFI6124KGOA](/sequence-files/IGVFFI6124KGOA/), [IGVFFI7122VMXB](/sequence-files/IGVFFI7122VMXB/), [IGVFFI7933EUWX](/sequence-files/IGVFFI7933EUWX/), [IGVFFI9386OVBT](/sequence-files/IGVFFI9386OVBT/), [IGVFFI7798XLLQ](/sequence-files/IGVFFI7798XLLQ/) which lack specification of a `sequencing_kit`. Sequence files should specify a sequencing kit.",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_inconsistent_sequencing_kit",
                "path": "/measurement-sets/IGVFDS9719TLJG/"
            },
            {
                "category": "missing sequence specification",
                "detail": "Measurement set [IGVFDS9719TLJG](/measurement-sets/IGVFDS9719TLJG/) has sequence file(s): [IGVFFI6515CXFG](/sequence-files/IGVFFI6515CXFG/), [IGVFFI3469ROBJ](/sequence-files/IGVFFI3469ROBJ/), [IGVFFI8967OETR](/sequence-files/IGVFFI8967OETR/), [IGVFFI5398AFVH](/sequence-files/IGVFFI5398AFVH/), [IGVFFI2878WPQO](/sequence-files/IGVFFI2878WPQO/), [IGVFFI1780VLLT](/sequence-files/IGVFFI1780VLLT/), [IGVFFI1071UCGG](/sequence-files/IGVFFI1071UCGG/), [IGVFFI2385AGWX](/sequence-files/IGVFFI2385AGWX/), [IGVFFI7900NWVW](/sequence-files/IGVFFI7900NWVW/), [IGVFFI3115KPXY](/sequence-files/IGVFFI3115KPXY/), [IGVFFI0382VPVJ](/sequence-files/IGVFFI0382VPVJ/), [IGVFFI6922DFYU](/sequence-files/IGVFFI6922DFYU/), [IGVFFI7308VLWN](/sequence-files/IGVFFI7308VLWN/), [IGVFFI0964THJW](/sequence-files/IGVFFI0964THJW/), [IGVFFI6075BHMZ](/sequence-files/IGVFFI6075BHMZ/), [IGVFFI3799NCCX](/sequence-files/IGVFFI3799NCCX/), [IGVFFI6663FKOJ](/sequence-files/IGVFFI6663FKOJ/), [IGVFFI8997KYJZ](/sequence-files/IGVFFI8997KYJZ/), [IGVFFI5218EJHS](/sequence-files/IGVFFI5218EJHS/), [IGVFFI2530KYTX](/sequence-files/IGVFFI2530KYTX/), [IGVFFI7261AWDM](/sequence-files/IGVFFI7261AWDM/), [IGVFFI5931ZGLQ](/sequence-files/IGVFFI5931ZGLQ/), [IGVFFI7261IAWJ](/sequence-files/IGVFFI7261IAWJ/), [IGVFFI8275GHLE](/sequence-files/IGVFFI8275GHLE/), [IGVFFI2065UBFV](/sequence-files/IGVFFI2065UBFV/), [IGVFFI4268ETMY](/sequence-files/IGVFFI4268ETMY/), [IGVFFI0239JATF](/sequence-files/IGVFFI0239JATF/), [IGVFFI3799QOHU](/sequence-files/IGVFFI3799QOHU/), [IGVFFI1366CYMV](/sequence-files/IGVFFI1366CYMV/), [IGVFFI7492UEXV](/sequence-files/IGVFFI7492UEXV/), [IGVFFI6587XSFM](/sequence-files/IGVFFI6587XSFM/), [IGVFFI5325KJIB](/sequence-files/IGVFFI5325KJIB/), [IGVFFI6940SYHQ](/sequence-files/IGVFFI6940SYHQ/), [IGVFFI5765ASKS](/sequence-files/IGVFFI5765ASKS/), [IGVFFI7511CYIV](/sequence-files/IGVFFI7511CYIV/), [IGVFFI8840JZVO](/sequence-files/IGVFFI8840JZVO/), [IGVFFI6026PRJQ](/sequence-files/IGVFFI6026PRJQ/), [IGVFFI2491OWOW](/sequence-files/IGVFFI2491OWOW/), [IGVFFI3746CBBD](/sequence-files/IGVFFI3746CBBD/), [IGVFFI0732SWOQ](/sequence-files/IGVFFI0732SWOQ/), [IGVFFI1285WULZ](/sequence-files/IGVFFI1285WULZ/), [IGVFFI6778GBHQ](/sequence-files/IGVFFI6778GBHQ/), [IGVFFI1603QEIE](/sequence-files/IGVFFI1603QEIE/), [IGVFFI6124KGOA](/sequence-files/IGVFFI6124KGOA/), [IGVFFI7122VMXB](/sequence-files/IGVFFI7122VMXB/), [IGVFFI7933EUWX](/sequence-files/IGVFFI7933EUWX/), [IGVFFI9386OVBT](/sequence-files/IGVFFI9386OVBT/), [IGVFFI7798XLLQ](/sequence-files/IGVFFI7798XLLQ/) which do not have any `seqspecs`. Sequence files in a file set are expected to link to a sequence specification file.",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_missing_seqspec",
                "path": "/measurement-sets/IGVFDS9719TLJG/"
            }
        ],
        "WARNING": [
            {
                "category": "missing auxiliary set",
                "detail": "Measurement set [IGVFDS9719TLJG](/measurement-sets/IGVFDS9719TLJG/) has no cell sorting `auxiliary_sets`. CRISPR-based measurement sets that utilize flow cytometry are expected to link to a cell sorting auxiliary set.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_missing_auxiliary_set",
                "path": "/measurement-sets/IGVFDS9719TLJG/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization",
        "contact_pi": {
            "@id": "/users/6c75dbfa-635e-4a7a-8ec8-9e51e9c380a4/",
            "title": "Jesse Engreitz"
        },
        "title": "Stanford Center for Connecting DNA Variants to Function and Phenotype"
    },
    "control_file_sets": [
        {
            "@id": "/measurement-sets/IGVFDS4103BJLT/",
            "accession": "IGVFDS4103BJLT",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-THP1-PE2_Exp4_NegControl_AmpliconSequencing"
            ],
            "status": "preview"
        }
    ],
    "control_for": [],
    "creation_timestamp": "2024-11-25T23:52:37.491305+00:00",
    "donors": [
        {
            "@id": "/human-donors/IGVFDO7359LVPI/",
            "accession": "IGVFDO7359LVPI",
            "aliases": [
                "igvf:donor_of_THP1"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        }
    ],
    "externally_hosted": false,
    "file_set_type": "experimental data",
    "files": [
        {
            "@id": "/sequence-files/IGVFFI6515CXFG/",
            "accession": "IGVFFI6515CXFG",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep8_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:34:51.422736+00:00",
            "file_format": "fastq",
            "file_size": 15096899,
            "href": "/sequence-files/IGVFFI6515CXFG/@@download/IGVFFI6515CXFG.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/f5ee5924-a34a-4b07-9874-c7769e811569/IGVFFI6515CXFG.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep8_S506_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI3469ROBJ/",
            "accession": "IGVFFI3469ROBJ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep12_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:40:05.290432+00:00",
            "file_format": "fastq",
            "file_size": 13173646,
            "href": "/sequence-files/IGVFFI3469ROBJ/@@download/IGVFFI3469ROBJ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/e7325465-6447-4904-b5cf-94b37c8b31ea/IGVFFI3469ROBJ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep12_S510_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI8967OETR/",
            "accession": "IGVFFI8967OETR",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep2_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:27:33.543068+00:00",
            "file_format": "fastq",
            "file_size": 14244268,
            "href": "/sequence-files/IGVFFI8967OETR/@@download/IGVFFI8967OETR.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/6c6ef62a-00ec-4193-8936-6b7be0e238a0/IGVFFI8967OETR.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep2_S500_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI5398AFVH/",
            "accession": "IGVFFI5398AFVH",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep4_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:30:11.351525+00:00",
            "file_format": "fastq",
            "file_size": 14450673,
            "href": "/sequence-files/IGVFFI5398AFVH/@@download/IGVFFI5398AFVH.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/811a8156-1115-49c5-8364-7ae1e8990733/IGVFFI5398AFVH.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep4_S502_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI2878WPQO/",
            "accession": "IGVFFI2878WPQO",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep5_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:31:22.229012+00:00",
            "file_format": "fastq",
            "file_size": 13632972,
            "href": "/sequence-files/IGVFFI2878WPQO/@@download/IGVFFI2878WPQO.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/f0f3e811-60d1-4d38-a226-e473ff76f584/IGVFFI2878WPQO.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep5_S503_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI1780VLLT/",
            "accession": "IGVFFI1780VLLT",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep10_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:37:25.813688+00:00",
            "file_format": "fastq",
            "file_size": 14689976,
            "href": "/sequence-files/IGVFFI1780VLLT/@@download/IGVFFI1780VLLT.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/e3d5caf9-adc4-4079-a2fc-2b74e04d4458/IGVFFI1780VLLT.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep10_S508_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI1071UCGG/",
            "accession": "IGVFFI1071UCGG",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep3_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:29:00.817173+00:00",
            "file_format": "fastq",
            "file_size": 14678595,
            "href": "/sequence-files/IGVFFI1071UCGG/@@download/IGVFFI1071UCGG.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/4ece031e-d062-45f6-a6be-18d80e0a6294/IGVFFI1071UCGG.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep3_S501_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI2385AGWX/",
            "accession": "IGVFFI2385AGWX",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep7_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:33:40.716292+00:00",
            "file_format": "fastq",
            "file_size": 14940637,
            "href": "/sequence-files/IGVFFI2385AGWX/@@download/IGVFFI2385AGWX.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/9595487f-f0e5-430c-ba17-3b79ca46b498/IGVFFI2385AGWX.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep7_S505_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7900NWVW/",
            "accession": "IGVFFI7900NWVW",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep9_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:36:09.177645+00:00",
            "file_format": "fastq",
            "file_size": 14599424,
            "href": "/sequence-files/IGVFFI7900NWVW/@@download/IGVFFI7900NWVW.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/b51452e9-be2b-4874-aec9-1c0802328d9a/IGVFFI7900NWVW.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep9_S507_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI3115KPXY/",
            "accession": "IGVFFI3115KPXY",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep6_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:32:31.448549+00:00",
            "file_format": "fastq",
            "file_size": 18978748,
            "href": "/sequence-files/IGVFFI3115KPXY/@@download/IGVFFI3115KPXY.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/44935115-c336-467a-bbc5-16d91ba99560/IGVFFI3115KPXY.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep6_S504_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI0382VPVJ/",
            "accession": "IGVFFI0382VPVJ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep1_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:26:05.240252+00:00",
            "file_format": "fastq",
            "file_size": 12704465,
            "href": "/sequence-files/IGVFFI0382VPVJ/@@download/IGVFFI0382VPVJ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/31a8c2fb-4ee8-413c-9550-8a4d833cf1e0/IGVFFI0382VPVJ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep1_S499_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI6922DFYU/",
            "accession": "IGVFFI6922DFYU",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep11_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T06:38:43.112168+00:00",
            "file_format": "fastq",
            "file_size": 14033937,
            "href": "/sequence-files/IGVFFI6922DFYU/@@download/IGVFFI6922DFYU.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/3ff6fd15-bd50-454f-8a98-0deb6e2ea2b5/IGVFFI6922DFYU.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep11_S509_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7308VLWN/",
            "accession": "IGVFFI7308VLWN",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep11_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:50:39.743754+00:00",
            "file_format": "fastq",
            "file_size": 16265544,
            "href": "/sequence-files/IGVFFI7308VLWN/@@download/IGVFFI7308VLWN.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/522f0220-8245-43c6-9687-4cd09766bae0/IGVFFI7308VLWN.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep11_S509_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI0964THJW/",
            "accession": "IGVFFI0964THJW",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep7_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:42:55.096250+00:00",
            "file_format": "fastq",
            "file_size": 17407451,
            "href": "/sequence-files/IGVFFI0964THJW/@@download/IGVFFI0964THJW.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/a98972a8-4eb3-4607-b678-ecd02170d87c/IGVFFI0964THJW.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep7_S505_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI6075BHMZ/",
            "accession": "IGVFFI6075BHMZ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep8_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:44:48.850909+00:00",
            "file_format": "fastq",
            "file_size": 17364030,
            "href": "/sequence-files/IGVFFI6075BHMZ/@@download/IGVFFI6075BHMZ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/01de0646-8e39-4896-aa3c-376b8c6f4778/IGVFFI6075BHMZ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep8_S506_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI3799NCCX/",
            "accession": "IGVFFI3799NCCX",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep3_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:36:06.072864+00:00",
            "file_format": "fastq",
            "file_size": 16942359,
            "href": "/sequence-files/IGVFFI3799NCCX/@@download/IGVFFI3799NCCX.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/8b7a6c06-4bb2-4c8f-a422-e37c75556397/IGVFFI3799NCCX.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep3_S501_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI6663FKOJ/",
            "accession": "IGVFFI6663FKOJ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep5_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:39:26.153204+00:00",
            "file_format": "fastq",
            "file_size": 15914470,
            "href": "/sequence-files/IGVFFI6663FKOJ/@@download/IGVFFI6663FKOJ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/53407a9f-e102-4f12-8072-02bea1e17b12/IGVFFI6663FKOJ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep5_S503_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI8997KYJZ/",
            "accession": "IGVFFI8997KYJZ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep12_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:52:45.522113+00:00",
            "file_format": "fastq",
            "file_size": 15273105,
            "href": "/sequence-files/IGVFFI8997KYJZ/@@download/IGVFFI8997KYJZ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/a9e7e9af-4357-408d-8846-a27ff4010931/IGVFFI8997KYJZ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep12_S510_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI5218EJHS/",
            "accession": "IGVFFI5218EJHS",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep2_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:34:05.582168+00:00",
            "file_format": "fastq",
            "file_size": 16361584,
            "href": "/sequence-files/IGVFFI5218EJHS/@@download/IGVFFI5218EJHS.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/57dfef11-df60-4bf1-acee-3962ca2afd6a/IGVFFI5218EJHS.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep2_S500_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI2530KYTX/",
            "accession": "IGVFFI2530KYTX",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep6_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:41:12.018131+00:00",
            "file_format": "fastq",
            "file_size": 21981444,
            "href": "/sequence-files/IGVFFI2530KYTX/@@download/IGVFFI2530KYTX.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/23175ff4-b2dd-46a1-bf23-4c52e0648502/IGVFFI2530KYTX.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep6_S504_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7261AWDM/",
            "accession": "IGVFFI7261AWDM",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep9_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:46:41.178654+00:00",
            "file_format": "fastq",
            "file_size": 16820541,
            "href": "/sequence-files/IGVFFI7261AWDM/@@download/IGVFFI7261AWDM.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/72d23fdb-b69e-4ce6-8a6e-269f40eee2e2/IGVFFI7261AWDM.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep9_S507_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI5931ZGLQ/",
            "accession": "IGVFFI5931ZGLQ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep1_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:32:07.455408+00:00",
            "file_format": "fastq",
            "file_size": 14632619,
            "href": "/sequence-files/IGVFFI5931ZGLQ/@@download/IGVFFI5931ZGLQ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/7124f70f-8653-43cc-bf7b-fdf090326b1d/IGVFFI5931ZGLQ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep1_S499_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7261IAWJ/",
            "accession": "IGVFFI7261IAWJ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep4_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:37:42.628877+00:00",
            "file_format": "fastq",
            "file_size": 16916194,
            "href": "/sequence-files/IGVFFI7261IAWJ/@@download/IGVFFI7261IAWJ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/51ef86ba-30e5-4474-91fb-05d72bd19040/IGVFFI7261IAWJ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep4_S502_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI8275GHLE/",
            "accession": "IGVFFI8275GHLE",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep10_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T08:48:38.871145+00:00",
            "file_format": "fastq",
            "file_size": 17084256,
            "href": "/sequence-files/IGVFFI8275GHLE/@@download/IGVFFI8275GHLE.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/e6c09aa4-b577-46e5-a524-1fae7a2a0945/IGVFFI8275GHLE.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep10_S508_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI2065UBFV/",
            "accession": "IGVFFI2065UBFV",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep4_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:26:24.151380+00:00",
            "file_format": "fastq",
            "file_size": 6434052,
            "href": "/sequence-files/IGVFFI2065UBFV/@@download/IGVFFI2065UBFV.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/5b3d9165-fc25-4dcd-b20d-91bcebefde6b/IGVFFI2065UBFV.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep4_S502_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI4268ETMY/",
            "accession": "IGVFFI4268ETMY",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep7_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:33:05.558710+00:00",
            "file_format": "fastq",
            "file_size": 6608329,
            "href": "/sequence-files/IGVFFI4268ETMY/@@download/IGVFFI4268ETMY.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/29f06dc1-d671-4034-93f0-a542a60958fa/IGVFFI4268ETMY.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep7_S505_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI0239JATF/",
            "accession": "IGVFFI0239JATF",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep3_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:24:06.891562+00:00",
            "file_format": "fastq",
            "file_size": 6285840,
            "href": "/sequence-files/IGVFFI0239JATF/@@download/IGVFFI0239JATF.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/2085822e-4789-4c36-a5e3-32c4932c9314/IGVFFI0239JATF.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep3_S501_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI3799QOHU/",
            "accession": "IGVFFI3799QOHU",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep2_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:21:09.843260+00:00",
            "file_format": "fastq",
            "file_size": 6020972,
            "href": "/sequence-files/IGVFFI3799QOHU/@@download/IGVFFI3799QOHU.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/9b30ca47-03b4-4cee-9db8-f1fad052d1f1/IGVFFI3799QOHU.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep2_S500_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI1366CYMV/",
            "accession": "IGVFFI1366CYMV",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep1_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:18:16.634360+00:00",
            "file_format": "fastq",
            "file_size": 5973132,
            "href": "/sequence-files/IGVFFI1366CYMV/@@download/IGVFFI1366CYMV.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/49ca08a6-0e63-4650-8141-ddb4d70b845c/IGVFFI1366CYMV.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep1_S499_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7492UEXV/",
            "accession": "IGVFFI7492UEXV",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep11_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:42:22.375553+00:00",
            "file_format": "fastq",
            "file_size": 6498960,
            "href": "/sequence-files/IGVFFI7492UEXV/@@download/IGVFFI7492UEXV.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/2c6fa3a2-9827-4971-9f95-000e1ab3cf1a/IGVFFI7492UEXV.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep11_S509_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI6587XSFM/",
            "accession": "IGVFFI6587XSFM",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep12_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:44:28.635089+00:00",
            "file_format": "fastq",
            "file_size": 5857281,
            "href": "/sequence-files/IGVFFI6587XSFM/@@download/IGVFFI6587XSFM.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/eeecd202-770f-4b28-8b3d-6b18ae4f8f1d/IGVFFI6587XSFM.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep12_S510_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI5325KJIB/",
            "accession": "IGVFFI5325KJIB",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep6_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:30:56.102995+00:00",
            "file_format": "fastq",
            "file_size": 7861302,
            "href": "/sequence-files/IGVFFI5325KJIB/@@download/IGVFFI5325KJIB.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/f6706018-6d15-4e0f-a0fa-afef8eb6ac17/IGVFFI5325KJIB.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep6_S504_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI6940SYHQ/",
            "accession": "IGVFFI6940SYHQ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep2_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:16:50.870343+00:00",
            "file_format": "fastq",
            "file_size": 5661627,
            "href": "/sequence-files/IGVFFI6940SYHQ/@@download/IGVFFI6940SYHQ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/825c920f-ea93-478c-b4ec-904939f41d05/IGVFFI6940SYHQ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep2_S500_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI5765ASKS/",
            "accession": "IGVFFI5765ASKS",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep5_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:28:38.487398+00:00",
            "file_format": "fastq",
            "file_size": 6729591,
            "href": "/sequence-files/IGVFFI5765ASKS/@@download/IGVFFI5765ASKS.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/19c6b710-7c14-4a6b-912a-9d42819ceb2c/IGVFFI5765ASKS.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep5_S503_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7511CYIV/",
            "accession": "IGVFFI7511CYIV",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep9_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:37:46.053445+00:00",
            "file_format": "fastq",
            "file_size": 6850101,
            "href": "/sequence-files/IGVFFI7511CYIV/@@download/IGVFFI7511CYIV.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/e0681cd6-5231-4d67-833b-d362651831a6/IGVFFI7511CYIV.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep9_S507_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI8840JZVO/",
            "accession": "IGVFFI8840JZVO",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep8_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:35:25.606948+00:00",
            "file_format": "fastq",
            "file_size": 6611444,
            "href": "/sequence-files/IGVFFI8840JZVO/@@download/IGVFFI8840JZVO.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/b55d0322-f06a-4b67-8115-c17353be52b5/IGVFFI8840JZVO.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep8_S506_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI6026PRJQ/",
            "accession": "IGVFFI6026PRJQ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep10_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T12:40:07.150848+00:00",
            "file_format": "fastq",
            "file_size": 6274257,
            "href": "/sequence-files/IGVFFI6026PRJQ/@@download/IGVFFI6026PRJQ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/73932fe2-2e31-4945-9fb2-878f925bd269/IGVFFI6026PRJQ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep10_S508_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI2491OWOW/",
            "accession": "IGVFFI2491OWOW",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep7_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:29:33.009361+00:00",
            "file_format": "fastq",
            "file_size": 5928691,
            "href": "/sequence-files/IGVFFI2491OWOW/@@download/IGVFFI2491OWOW.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/262caeee-b601-47b7-bfe1-4b89e061908c/IGVFFI2491OWOW.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep7_S505_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI3746CBBD/",
            "accession": "IGVFFI3746CBBD",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep1_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:13:55.549460+00:00",
            "file_format": "fastq",
            "file_size": 4994768,
            "href": "/sequence-files/IGVFFI3746CBBD/@@download/IGVFFI3746CBBD.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/ddae275a-d0b1-4e83-adae-4323464146dc/IGVFFI3746CBBD.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep1_S499_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI0732SWOQ/",
            "accession": "IGVFFI0732SWOQ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep11_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:39:26.678681+00:00",
            "file_format": "fastq",
            "file_size": 5535003,
            "href": "/sequence-files/IGVFFI0732SWOQ/@@download/IGVFFI0732SWOQ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/894344ea-1aaa-4553-a5d9-86ce3e66be25/IGVFFI0732SWOQ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep11_S509_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI1285WULZ/",
            "accession": "IGVFFI1285WULZ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep10_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:36:58.251577+00:00",
            "file_format": "fastq",
            "file_size": 5853533,
            "href": "/sequence-files/IGVFFI1285WULZ/@@download/IGVFFI1285WULZ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/59f49fc9-b4d5-457e-907a-5f448ce14b29/IGVFFI1285WULZ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep10_S508_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI6778GBHQ/",
            "accession": "IGVFFI6778GBHQ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep9_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:34:28.715686+00:00",
            "file_format": "fastq",
            "file_size": 5835552,
            "href": "/sequence-files/IGVFFI6778GBHQ/@@download/IGVFFI6778GBHQ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/9ad11793-5a92-4638-aa5f-22f0494ce200/IGVFFI6778GBHQ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep9_S507_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI1603QEIE/",
            "accession": "IGVFFI1603QEIE",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep3_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:19:55.267163+00:00",
            "file_format": "fastq",
            "file_size": 5835372,
            "href": "/sequence-files/IGVFFI1603QEIE/@@download/IGVFFI1603QEIE.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/3339ed1e-ea32-4311-a4cc-0b958544da8a/IGVFFI1603QEIE.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep3_S501_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI6124KGOA/",
            "accession": "IGVFFI6124KGOA",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep6_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:27:03.026974+00:00",
            "file_format": "fastq",
            "file_size": 7365300,
            "href": "/sequence-files/IGVFFI6124KGOA/@@download/IGVFFI6124KGOA.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/9e621fc5-17d0-44b5-826c-d2561c1744a9/IGVFFI6124KGOA.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep6_S504_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7122VMXB/",
            "accession": "IGVFFI7122VMXB",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep5_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:24:34.739412+00:00",
            "file_format": "fastq",
            "file_size": 5533220,
            "href": "/sequence-files/IGVFFI7122VMXB/@@download/IGVFFI7122VMXB.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/dc02dda7-fc4f-412e-af6a-52fec413bc7a/IGVFFI7122VMXB.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep5_S503_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7933EUWX/",
            "accession": "IGVFFI7933EUWX",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep12_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:41:45.569786+00:00",
            "file_format": "fastq",
            "file_size": 5222368,
            "href": "/sequence-files/IGVFFI7933EUWX/@@download/IGVFFI7933EUWX.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/0f455e62-9e1d-48a6-a03d-a2e762de711e/IGVFFI7933EUWX.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep12_S510_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI9386OVBT/",
            "accession": "IGVFFI9386OVBT",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep8_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:31:58.702574+00:00",
            "file_format": "fastq",
            "file_size": 6024766,
            "href": "/sequence-files/IGVFFI9386OVBT/@@download/IGVFFI9386OVBT.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/5880c8cd-edf6-4752-b652-a2107f3a51b7/IGVFFI9386OVBT.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep8_S506_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7798XLLQ/",
            "accession": "IGVFFI7798XLLQ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep4_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2024-11-26T16:22:17.054102+00:00",
            "file_format": "fastq",
            "file_size": 5820588,
            "href": "/sequence-files/IGVFFI7798XLLQ/@@download/IGVFFI7798XLLQ.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/11/26/a095ca98-bdc5-4799-93aa-f505cb8e4a50/IGVFFI7798XLLQ.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "240426S024-Enhancer-THP1-PPIF_Enhancer_val_guides-Amp_PPIF_enhancer-BioRep1-FFrep2-BinD-PCRrep4_S502_I2_001.fastq.gz",
            "upload_status": "validated"
        }
    ],
    "input_for": [
        "/analysis-sets/IGVFDS4833ZRTZ/"
    ],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "notes": "This measurement set previously used Variant FlowFISH as a preferred_assay_title, but this enum is now removed. So it has been defaulted to Variant-EFFECTS.",
    "preferred_assay_title": "Variant-EFFECTS",
    "protocols": [
        "https://www.protocols.io/view/flowfish-with-primeflow-36wgq3q4olk5/v1"
    ],
    "samples": [
        {
            "@id": "/in-vitro-systems/IGVFSM4557RPUQ/",
            "@type": [
                "InVitroSystem",
                "Biosample",
                "Sample",
                "Item"
            ],
            "accession": "IGVFSM4557RPUQ",
            "aliases": [
                "jesse-engreitz:240426S024-PPIFenhancervalidation-THP1_Amp_PPIF_enhancer-BioRep1-FFrep2-BinD"
            ],
            "classifications": [
                "cell line"
            ],
            "construct_library_sets": [
                {
                    "@id": "/construct-library-sets/IGVFDS4955GEYO/",
                    "accession": "IGVFDS4955GEYO",
                    "file_set_type": "guide library",
                    "status": "preview",
                    "summary": "guide (sgRNA) library targeting sequence variants in a genomic locus"
                }
            ],
            "modifications": [
                {
                    "@id": "/crispr-modifications/fc6bc0b3-a064-47d0-b95d-a9af14bb1624/",
                    "modality": "prime editing",
                    "status": "released"
                }
            ],
            "sample_terms": [
                {
                    "@id": "/sample-terms/EFO_0001253/",
                    "@type": [
                        "SampleTerm",
                        "OntologyTerm",
                        "Item"
                    ],
                    "aliases": [
                        "igvf:THP-1"
                    ],
                    "status": "released",
                    "summary": "THP-1",
                    "term_name": "THP-1"
                }
            ],
            "status": "preview",
            "summary": "THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library",
            "taxa": "Homo sapiens"
        }
    ],
    "schema_version": "23",
    "status": "preview",
    "submitted_by": {
        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
        "title": "Michael Montgomery"
    },
    "submitted_files_timestamp": "2024-11-26T06:26:05.240252+00:00",
    "summary": "CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus",
    "targeted_genes": [
        {
            "@id": "/genes/ENSG00000108179/",
            "geneid": "ENSG00000108179",
            "name": "peptidylprolyl isomerase F",
            "status": "released",
            "symbol": "PPIF",
            "synonyms": [
                "rotamase F",
                "CYP3",
                "cyclophilin F",
                "mitochondrial cyclophilin",
                "peptidyl-prolyl cis-trans isomerase, mitochondrial",
                "CypD",
                "Cyp-D",
                "cyclophilin 3",
                "cyclophilin D",
                "CyP-M",
                "peptidyl-prolyl cis-trans isomerase F, mitochondrial",
                "PPIase F"
            ]
        }
    ],
    "uuid": "529ee181-f410-4fd9-8da1-8fcde57aed39"
}