{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS9706CAUA/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS9706CAUA",
"aliases": [
"ali-mortazavi:003_67B_illumina"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000751](/sample-terms/NTR_0000751/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000751/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000647](/sample-terms/NTR_0000647/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000647/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000750](/sample-terms/NTR_0000750/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000750/"
},
{
"category": "missing publication",
"detail": "Measurement set [IGVFDS9706CAUA](/measurement-sets/IGVFDS9706CAUA/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS9706CAUA/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS9706CAUA](/measurement-sets/IGVFDS9706CAUA/) has in progress subobject tabular file [IGVFFI1138MCVX](/tabular-files/IGVFFI1138MCVX/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS9706CAUA/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS9706CAUA](/measurement-sets/IGVFDS9706CAUA/) has in progress subobject tabular file [IGVFFI2591OFQO](/tabular-files/IGVFFI2591OFQO/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS9706CAUA/"
},
{
"category": "mismatched status",
"detail": "Released multiplexed sample [IGVFSM3444OJWO](/multiplexed-samples/IGVFSM3444OJWO/) has in progress subobject tabular file [IGVFFI4465NRTD](/tabular-files/IGVFFI4465NRTD/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/multiplexed-samples/IGVFSM3444OJWO/"
},
{
"category": "missing publication",
"detail": "Multiplexed sample [IGVFSM3444OJWO](/multiplexed-samples/IGVFSM3444OJWO/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/multiplexed-samples/IGVFSM3444OJWO/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000646](/sample-terms/NTR_0000646/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000646/"
}
]
},
"award": {
"@id": "/awards/HG012077/",
"component": "mapping",
"contact_pi": {
"@id": "/users/2c33e192-e815-4384-a220-72a0992cbe24/",
"title": "Ali Mortazavi"
},
"title": "Center for Mouse Genomic Variation at Single Cell Resolution"
},
"control_for": [],
"creation_timestamp": "2023-10-05T00:00:57.115462+00:00",
"data_use_limitation_summaries": [
"no certificate"
],
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{
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"ali-mortazavi:079_PWKJ_10M"
],
"sex": "male",
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},
{
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],
"sex": "male",
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},
{
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],
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},
{
"@id": "/rodent-donors/IGVFDO5539RLXJ/",
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],
"sex": "male",
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},
{
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],
"sex": "male",
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},
{
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],
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},
{
"@id": "/rodent-donors/IGVFDO4725SNCJ/",
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],
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},
{
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],
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},
{
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],
"sex": "female",
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},
{
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],
"sex": "female",
"status": "released",
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},
{
"@id": "/rodent-donors/IGVFDO2106EEWB/",
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],
"sex": "female",
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},
{
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],
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},
{
"@id": "/rodent-donors/IGVFDO7951JDSP/",
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],
"sex": "female",
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},
{
"@id": "/rodent-donors/IGVFDO0681EHNP/",
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],
"sex": "female",
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},
{
"@id": "/rodent-donors/IGVFDO6112GRYR/",
"accession": "IGVFDO6112GRYR",
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],
"sex": "male",
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},
{
"@id": "/rodent-donors/IGVFDO6219LVKW/",
"accession": "IGVFDO6219LVKW",
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],
"sex": "female",
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},
{
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],
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},
{
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{
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],
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},
{
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],
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},
{
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],
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},
{
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],
"sex": "female",
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},
{
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],
"sex": "female",
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},
{
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],
"sex": "male",
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},
{
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],
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},
{
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],
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},
{
"@id": "/rodent-donors/IGVFDO4469VYEZ/",
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},
{
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],
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},
{
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},
{
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{
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{
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{
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{
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},
{
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},
{
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],
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},
{
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},
{
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{
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},
{
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],
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},
{
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],
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},
{
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],
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},
{
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],
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},
{
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],
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},
{
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],
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},
{
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],
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},
{
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],
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},
{
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],
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},
{
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],
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},
{
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],
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},
{
"@id": "/rodent-donors/IGVFDO0696DMIA/",
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],
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},
{
"@id": "/rodent-donors/IGVFDO8322VYDU/",
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],
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},
{
"@id": "/rodent-donors/IGVFDO2319OUEC/",
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],
"sex": "male",
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"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7255VZBN/",
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],
"sex": "female",
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"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2517TXOT/",
"accession": "IGVFDO2517TXOT",
"aliases": [
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],
"sex": "female",
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"notes": "Preferred_assay_titles enum Parse Split-seq has been renamed to be Parse SPLiT-seq.",
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