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IGVFDS9698PDND

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scRNA Lib 27
buenrostro-bernstein:scRNA Lib 27

Sequencing Results (Illumina)

16 items
fastq
reads
R1
1428
833 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1524
2.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2386
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1620
2.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2578
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1716
2.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1524
850 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1428
2.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2482
438 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2290
437 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1509
  • buenrostro-bernstein:Donor 1509
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 27
  • buenrostro-bernstein:scATAC Lib 27
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad