{
"@context": "/terms/",
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],
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],
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},
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"INTERNAL_ACTION": [
{
"category": "missing sequence specification",
"detail": "Auxiliary set [IGVFDS8347TPDV](/auxiliary-sets/IGVFDS8347TPDV/) has sequence file(s): [IGVFFI3245JMHQ](/sequence-files/IGVFFI3245JMHQ/), [IGVFFI7612SSEB](/sequence-files/IGVFFI7612SSEB/), [IGVFFI8153ZVNU](/sequence-files/IGVFFI8153ZVNU/), [IGVFFI6464LXPC](/sequence-files/IGVFFI6464LXPC/), [IGVFFI9484FOLM](/sequence-files/IGVFFI9484FOLM/), [IGVFFI0800YEAV](/sequence-files/IGVFFI0800YEAV/) which do not have any `seqspecs`. Sequence files in a file set are expected to link to a sequence specification file.",
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"name": "audit_missing_seqspec",
"path": "/auxiliary-sets/IGVFDS8347TPDV/"
},
{
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"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS9654ACTQ/"
}
]
},
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}
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},
"title": "Massively parallel characterization of variants and elements impacting transcriptional regulation in dynamic cellular systems"
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{
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],
"sex": "male",
"status": "released",
"taxa": "Mus musculus"
}
],
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"upload_status": "validated"
},
{
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{
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{
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],
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],
"lab": {
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"title": "Jay Shendure, UW"
},
"notes": "The readout b59a5259-3a53-482b-a7a5-6f401bdad220 was removed from this measurement set.",
"preferred_assay_title": "MPRA",
"protocols": [
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],
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{
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}
],
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{
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"@type": [
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"Biosample",
"Sample",
"Item"
],
"accession": "IGVFSM8231RSVA",
"aliases": [
"jay-shendure:dev_CRE_mEBs_repA_bulk_day16"
],
"cell_fate_change_treatments": [
{
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"status": "released",
"summary": "Depletion of Leukemia inhibitory factor",
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}
],
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],
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{
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"file_set_type": "reporter library",
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"summary": "reporter library targeting accessible genome regions in many genomic loci"
}
],
"sample_terms": [
{
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"@type": [
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],
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"summary": "mouse embryonic stem cell",
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}
],
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"status": "released",
"term_name": "embryoid body"
},
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}
],
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},
"submitted_files_timestamp": "2023-12-09T00:55:07.897458+00:00",
"summary": "MPRA integrating a reporter library targeting accessible genome regions in many genomic loci",
"uuid": "d545c14f-52a8-4d42-8d4c-cc7483eca046"
}