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INDEXED
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MeasurementSet
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IGVFDS9587OBVM
IGVFDS9587OBVM
released
Json view
File Set Type
experimental data
Summary
RNA-seq
Assay Term
bulk RNA-seq assay
Sample Summaries
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens
Protocols
https://www.protocols.io/view/rna-seq-for-human-ipsc-cm-following-gsk3-inhibitio-kqdg32rb1v25
Aliases
charles-gersbach:measurement-set-bulk-rna-control-ipsc-cm-rep1
Sequencing Results (Illumina)
2 items
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI6063JLVO
fastq
reads
R2
1
Illumina NovaSeq 6000
3.1 GB
Charles Gersbach, Duke
validated
IGVFFI9694LYUA
fastq
reads
R1
1
Illumina NovaSeq 6000
2.9 GB
Charles Gersbach, Duke
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7851SPEI
InVitroSystem
GM25256 (WTC-11)
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days, male, Homo sapiens
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO3212TBUN
charles-gersbach:human-donor-WTC11
male
Homo sapiens
File Sets Using This Measurement Set as an Input
1 item
Accession
Type
Summary
Aliases
Lab
IGVFDS7046PDMA
AnalysisSet
RNA-seq: transcriptome alignments
charles-gersbach:analysis-set-bulk-rna-count
Charles Gersbach, Duke
File Sets Controlled by This Measurement Set
1 item
Accession
Type
Summary
Aliases
Lab
IGVFDS9314PRMO
MeasurementSet
RNA-seq
charles-gersbach:measurement-set-bulk-rna-chir4um-ipsc-cm-rep1
Charles Gersbach, Duke
Attribution
Award
HG012053
Principal Investigator(s)
Charles Gersbach
,
Gregory Crawford
,
Tim Reddy
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke