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IGVFDS9565KMHX

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scRNA Lib 9
buenrostro-bernstein:scRNA Lib 9

Sequencing Results (Illumina)

16 items
fastq
reads
R2
2254
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1392
829 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2446
463 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1488
2.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1584
2.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2350
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1680
2.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2446
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2254
465 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2350
466 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1509
  • buenrostro-bernstein:Donor 1509
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 9
  • buenrostro-bernstein:scATAC Lib 9
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad