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IGVFDS9540QIQR

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 178)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 432
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

39 items
Read Names
fastq
reads
R1
8748
Read 1
22LMVNLT4
15 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8652
Barcode index
22LMVNLT4
8.9 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9036
Barcode index
22LMVNLT4
8.7 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8940
Read 1
22LMVNLT4
14 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8460
Read 2
22LMVNLT4
14 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9036
Read 1
22LMVNLT4
15 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8940
Barcode index
22LMVNLT4
8.5 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8844
Read 1
22LMVNLT4
15 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8460
Read 1
22LMVNLT4
15 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1052
Barcode index
22773CLT3
518 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 178)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 423
Jason Buenrostro, Broad