{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS9492OFMM/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS9492OFMM",
"aliases": [
"igvf:corces_measurementSet_RP020_G3_ATAC"
],
"assay_term": {
"@id": "/assay-terms/OBI_0002762/",
"assay_slims": [
"chromatin accessibility"
],
"status": "released",
"term_name": "single-nucleus ATAC-seq"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [626d75db-88c2-45dc-b60e-0ba3d743554a](/phenotypic-features/626d75db-88c2-45dc-b60e-0ba3d743554a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [934388ae-cdc7-44f0-8047-e19d5c9bc009](/phenotypic-features/934388ae-cdc7-44f0-8047-e19d5c9bc009/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [95318355-70c3-4d1f-b769-23c8f6fcb818](/phenotypic-features/95318355-70c3-4d1f-b769-23c8f6fcb818/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [b97cca29-dfd6-4e48-83dc-143032916f09](/phenotypic-features/b97cca29-dfd6-4e48-83dc-143032916f09/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [7215e4eb-09b8-45c2-9152-ab968f0bea53](/phenotypic-features/7215e4eb-09b8-45c2-9152-ab968f0bea53/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [1356878d-9f70-4902-a5b3-1606e717cd56](/phenotypic-features/1356878d-9f70-4902-a5b3-1606e717cd56/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7315DYIP](/human-donors/IGVFDO7315DYIP/) has in progress subobject phenotypic feature [a908a834-3967-47b5-a8e3-ad3f051d0fa8](/phenotypic-features/a908a834-3967-47b5-a8e3-ad3f051d0fa8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7315DYIP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7315DYIP](/human-donors/IGVFDO7315DYIP/) has in progress subobject phenotypic feature [a8584c0a-a8db-4f93-b5df-7c5bfb58f16c](/phenotypic-features/a8584c0a-a8db-4f93-b5df-7c5bfb58f16c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7315DYIP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7315DYIP](/human-donors/IGVFDO7315DYIP/) has in progress subobject phenotypic feature [fc72aedb-99bf-4746-8ff8-d0f6988b741a](/phenotypic-features/fc72aedb-99bf-4746-8ff8-d0f6988b741a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7315DYIP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7315DYIP](/human-donors/IGVFDO7315DYIP/) has in progress subobject phenotypic feature [b71738a8-2bcb-4128-aab9-a0f9f1ba9d62](/phenotypic-features/b71738a8-2bcb-4128-aab9-a0f9f1ba9d62/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7315DYIP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7315DYIP](/human-donors/IGVFDO7315DYIP/) has in progress subobject phenotypic feature [eb53c56f-54bb-4364-b327-63a76034f93f](/phenotypic-features/eb53c56f-54bb-4364-b327-63a76034f93f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7315DYIP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [d6fded43-9df2-47be-ba89-6eddc5735c58](/phenotypic-features/d6fded43-9df2-47be-ba89-6eddc5735c58/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [fdce3d00-2799-422c-afc2-6258a113b2fa](/phenotypic-features/fdce3d00-2799-422c-afc2-6258a113b2fa/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [31468a8a-f7b3-450e-8ba0-1d38345e86fa](/phenotypic-features/31468a8a-f7b3-450e-8ba0-1d38345e86fa/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [2c7d3588-70c3-4cdf-909f-6063b09b76c4](/phenotypic-features/2c7d3588-70c3-4cdf-909f-6063b09b76c4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [914b3b0b-909c-4dc4-843a-e573cd4fd215](/phenotypic-features/914b3b0b-909c-4dc4-843a-e573cd4fd215/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [2aa59ffb-56f1-4cc1-9e70-14558ac277ce](/phenotypic-features/2aa59ffb-56f1-4cc1-9e70-14558ac277ce/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [ff6e836f-a0c6-4006-981a-358d2d3a7c03](/phenotypic-features/ff6e836f-a0c6-4006-981a-358d2d3a7c03/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [8dbc3bc3-9a27-4c5c-8796-75440e1d5e6d](/phenotypic-features/8dbc3bc3-9a27-4c5c-8796-75440e1d5e6d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [e82bb1f8-5de0-4d91-84d6-0d77ad1f2bc1](/phenotypic-features/e82bb1f8-5de0-4d91-84d6-0d77ad1f2bc1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [5a2e0d6a-6c20-4740-9cc9-f6eb1f00bee8](/phenotypic-features/5a2e0d6a-6c20-4740-9cc9-f6eb1f00bee8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [5dc91db6-1de5-4f9b-86fa-9470048ff8fb](/phenotypic-features/5dc91db6-1de5-4f9b-86fa-9470048ff8fb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [9306bbc1-b3a4-41f0-8fe3-03e191b98d99](/phenotypic-features/9306bbc1-b3a4-41f0-8fe3-03e191b98d99/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [a3ebe12e-cb3f-4f23-80a6-7d34274ef63b](/phenotypic-features/a3ebe12e-cb3f-4f23-80a6-7d34274ef63b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [5c7a7ccb-86ca-436a-ad7e-1e9e0a73b257](/phenotypic-features/5c7a7ccb-86ca-436a-ad7e-1e9e0a73b257/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [ec5a2713-387a-4247-9136-5582325519a7](/phenotypic-features/ec5a2713-387a-4247-9136-5582325519a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [3d726111-5f82-486e-9ba1-087d5380f9b1](/phenotypic-features/3d726111-5f82-486e-9ba1-087d5380f9b1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [53e177e7-37b6-4550-bef6-5c54b7039c01](/phenotypic-features/53e177e7-37b6-4550-bef6-5c54b7039c01/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [9d807290-34c2-4163-92c0-e55694701c5d](/phenotypic-features/9d807290-34c2-4163-92c0-e55694701c5d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [05b2e6f0-0942-4a97-ba30-ab604675cecf](/phenotypic-features/05b2e6f0-0942-4a97-ba30-ab604675cecf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [52075c15-8fbc-43f4-8ea7-daca38913ca8](/phenotypic-features/52075c15-8fbc-43f4-8ea7-daca38913ca8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [9a07089a-e55f-4366-921e-fc24aeb5118a](/phenotypic-features/9a07089a-e55f-4366-921e-fc24aeb5118a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [3190b852-4196-43c9-9da6-03869014b3bb](/phenotypic-features/3190b852-4196-43c9-9da6-03869014b3bb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [bf9c75cf-8f7f-44ab-ab3e-d796bc759162](/phenotypic-features/bf9c75cf-8f7f-44ab-ab3e-d796bc759162/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [e40b23ca-8049-458d-9daa-2d9a7bfe205d](/phenotypic-features/e40b23ca-8049-458d-9daa-2d9a7bfe205d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [0ffc3098-10e0-4829-bbfd-b484f751c849](/phenotypic-features/0ffc3098-10e0-4829-bbfd-b484f751c849/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [5cbf3905-6bd7-466b-b24d-ef7e96305b2e](/phenotypic-features/5cbf3905-6bd7-466b-b24d-ef7e96305b2e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [3295642e-7253-4693-922a-185ebc68252c](/phenotypic-features/3295642e-7253-4693-922a-185ebc68252c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [c827a4f6-432a-47ae-b18e-8c721e6d42e4](/phenotypic-features/c827a4f6-432a-47ae-b18e-8c721e6d42e4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [4da949c2-0863-4050-b35b-651746079c71](/phenotypic-features/4da949c2-0863-4050-b35b-651746079c71/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [b9ba6294-fa01-45db-a342-02c340c406aa](/phenotypic-features/b9ba6294-fa01-45db-a342-02c340c406aa/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [18bd0e6a-eaaa-4747-9487-a3a7612a9df7](/phenotypic-features/18bd0e6a-eaaa-4747-9487-a3a7612a9df7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5718REZU](/human-donors/IGVFDO5718REZU/) has in progress subobject phenotypic feature [0d8d534e-543f-42ff-9e5a-b3ef73cb374e](/phenotypic-features/0d8d534e-543f-42ff-9e5a-b3ef73cb374e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5718REZU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5718REZU](/human-donors/IGVFDO5718REZU/) has in progress subobject phenotypic feature [a4fdeb6a-be72-4729-b209-3c4d729d2080](/phenotypic-features/a4fdeb6a-be72-4729-b209-3c4d729d2080/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5718REZU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5718REZU](/human-donors/IGVFDO5718REZU/) has in progress subobject phenotypic feature [7809d834-676b-4003-8074-ec22a40aa6a8](/phenotypic-features/7809d834-676b-4003-8074-ec22a40aa6a8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5718REZU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5718REZU](/human-donors/IGVFDO5718REZU/) has in progress subobject phenotypic feature [b93fee50-2e7c-4280-9708-3c14650d346f](/phenotypic-features/b93fee50-2e7c-4280-9708-3c14650d346f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5718REZU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [30f0b56e-d6b3-43e1-8a81-6a16bb0e28ee](/phenotypic-features/30f0b56e-d6b3-43e1-8a81-6a16bb0e28ee/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [6398d5ed-9d64-42a5-bf1a-e4d9e52057b5](/phenotypic-features/6398d5ed-9d64-42a5-bf1a-e4d9e52057b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [b52127d9-b46f-4047-b2f5-3cd75d0933f0](/phenotypic-features/b52127d9-b46f-4047-b2f5-3cd75d0933f0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [f3c96e1e-630f-47c2-8e2d-5c9ba8d18598](/phenotypic-features/f3c96e1e-630f-47c2-8e2d-5c9ba8d18598/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [72f27db2-904b-4967-b919-f7c013e2eec8](/phenotypic-features/72f27db2-904b-4967-b919-f7c013e2eec8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [9109c230-248d-47c3-9cff-73daf2db597a](/phenotypic-features/9109c230-248d-47c3-9cff-73daf2db597a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [4a89566b-e6ee-4846-b48a-601a52c201ab](/phenotypic-features/4a89566b-e6ee-4846-b48a-601a52c201ab/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [3f62e325-e003-4f54-a5ed-1e5ab90bffbb](/phenotypic-features/3f62e325-e003-4f54-a5ed-1e5ab90bffbb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [fc1de29e-57a0-4cdb-ac92-597485b27795](/phenotypic-features/fc1de29e-57a0-4cdb-ac92-597485b27795/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [b1bcbcb3-200c-4716-b4cc-8cc2cc3ee208](/phenotypic-features/b1bcbcb3-200c-4716-b4cc-8cc2cc3ee208/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [4fa3d51f-faa7-48b9-b76b-58bbb23ba4cb](/phenotypic-features/4fa3d51f-faa7-48b9-b76b-58bbb23ba4cb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [a4aaf673-9174-4844-847b-c78dabed6ad5](/phenotypic-features/a4aaf673-9174-4844-847b-c78dabed6ad5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [a282f810-1f87-49f2-9fbf-1ebfbdfd0767](/phenotypic-features/a282f810-1f87-49f2-9fbf-1ebfbdfd0767/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [9d52ea4c-996d-4ee1-b1af-0bd95b6b700b](/phenotypic-features/9d52ea4c-996d-4ee1-b1af-0bd95b6b700b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [aa1d3d22-9591-48ff-805a-7b96892820fd](/phenotypic-features/aa1d3d22-9591-48ff-805a-7b96892820fd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [9ea884c0-3c76-4fde-8e4c-ae0c38797da1](/phenotypic-features/9ea884c0-3c76-4fde-8e4c-ae0c38797da1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [d94cc348-4571-4d2f-9e2c-1ae4e0c4c857](/phenotypic-features/d94cc348-4571-4d2f-9e2c-1ae4e0c4c857/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS9492OFMM](/measurement-sets/IGVFDS9492OFMM/) has sequence file(s): [IGVFFI3166CBGJ](/sequence-files/IGVFFI3166CBGJ/), [IGVFFI7088DUGR](/sequence-files/IGVFFI7088DUGR/), [IGVFFI3528WESF](/sequence-files/IGVFFI3528WESF/), [IGVFFI1448TAMC](/sequence-files/IGVFFI1448TAMC/), [IGVFFI5010CAVH](/sequence-files/IGVFFI5010CAVH/), [IGVFFI8974QHOD](/sequence-files/IGVFFI8974QHOD/), [IGVFFI4657XCCT](/sequence-files/IGVFFI4657XCCT/), [IGVFFI7315UXPS](/sequence-files/IGVFFI7315UXPS/), [IGVFFI1742UGSX](/sequence-files/IGVFFI1742UGSX/), [IGVFFI1384REDL](/sequence-files/IGVFFI1384REDL/), [IGVFFI2461UOKL](/sequence-files/IGVFFI2461UOKL/), [IGVFFI2540QBRT](/sequence-files/IGVFFI2540QBRT/), [IGVFFI3117GKCO](/sequence-files/IGVFFI3117GKCO/), [IGVFFI9151TOJR](/sequence-files/IGVFFI9151TOJR/), [IGVFFI9722YANB](/sequence-files/IGVFFI9722YANB/), [IGVFFI0633UEOG](/sequence-files/IGVFFI0633UEOG/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS9492OFMM/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS9492OFMM](/measurement-sets/IGVFDS9492OFMM/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS9492OFMM/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS9492OFMM](/measurement-sets/IGVFDS9492OFMM/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS9492OFMM/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T19:55:47.404092+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO5718REZU/",
"accession": "IGVFDO5718REZU",
"aliases": [
"igvf:corces_donor_BANN9926"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5228HTJC/",
"accession": "IGVFDO5228HTJC",
"aliases": [
"igvf:corces_donor_BANN1839"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3795BUZW/",
"accession": "IGVFDO3795BUZW",
"aliases": [
"igvf:corces_donor_BANN1311"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8504RBEL/",
"accession": "IGVFDO8504RBEL",
"aliases": [
"igvf:corces_donor_BANN1546"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1278CNID/",
"accession": "IGVFDO1278CNID",
"aliases": [
"igvf:corces_donor_BANN1506"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3501RYHX/",
"accession": "IGVFDO3501RYHX",
"aliases": [
"igvf:corces_donor_BANN1959"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8458OKEW/",
"accession": "IGVFDO8458OKEW",
"aliases": [
"igvf:corces_donor_BANN1623"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4053HEKW/",
"accession": "IGVFDO4053HEKW",
"aliases": [
"igvf:corces_donor_BANN1317"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6335EDSP/",
"accession": "IGVFDO6335EDSP",
"aliases": [
"igvf:corces_donor_BANN1329"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0909BNTN/",
"accession": "IGVFDO0909BNTN",
"aliases": [
"igvf:corces_donor_BANN1554"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0180JQCL/",
"accession": "IGVFDO0180JQCL",
"aliases": [
"igvf:corces_donor_BANN1344"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7315DYIP/",
"accession": "IGVFDO7315DYIP",
"aliases": [
"igvf:corces_donor_BANN1089"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI3166CBGJ/",
"accession": "IGVFFI3166CBGJ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L006_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:47:42.606274+00:00",
"file_format": "fastq",
"file_size": 442285639,
"href": "/sequence-files/IGVFFI3166CBGJ/@@download/IGVFFI3166CBGJ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/67ff62bb-cb6a-4554-b334-107bd491d88f/IGVFFI3166CBGJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L006_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7088DUGR/",
"accession": "IGVFFI7088DUGR",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L008_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:48:24.206294+00:00",
"file_format": "fastq",
"file_size": 1887621900,
"href": "/sequence-files/IGVFFI7088DUGR/@@download/IGVFFI7088DUGR.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/eb2150ed-ac96-4503-86a5-580adeb2e5e3/IGVFFI7088DUGR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L008_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3528WESF/",
"accession": "IGVFFI3528WESF",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L005_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:47:39.607985+00:00",
"file_format": "fastq",
"file_size": 1769791777,
"href": "/sequence-files/IGVFFI3528WESF/@@download/IGVFFI3528WESF.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/849a43e3-6018-4038-9b57-d6dbfa76d1cd/IGVFFI3528WESF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L005_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1448TAMC/",
"accession": "IGVFFI1448TAMC",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L005_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:47:29.671021+00:00",
"file_format": "fastq",
"file_size": 436634380,
"href": "/sequence-files/IGVFFI1448TAMC/@@download/IGVFFI1448TAMC.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/7afb3bc1-3d3d-407d-a3da-ea6cafb4c889/IGVFFI1448TAMC.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L005_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5010CAVH/",
"accession": "IGVFFI5010CAVH",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L006_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:47:54.299484+00:00",
"file_format": "fastq",
"file_size": 1795102122,
"href": "/sequence-files/IGVFFI5010CAVH/@@download/IGVFFI5010CAVH.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/56c51ded-9050-477a-9bd1-f8ccfe8b3f44/IGVFFI5010CAVH.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L006_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8974QHOD/",
"accession": "IGVFFI8974QHOD",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L006_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:47:49.734259+00:00",
"file_format": "fastq",
"file_size": 1024005678,
"href": "/sequence-files/IGVFFI8974QHOD/@@download/IGVFFI8974QHOD.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/01339c2c-052a-4499-aa4e-03eb8339661e/IGVFFI8974QHOD.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L006_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4657XCCT/",
"accession": "IGVFFI4657XCCT",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:48:00.764451+00:00",
"file_format": "fastq",
"file_size": 1862690404,
"href": "/sequence-files/IGVFFI4657XCCT/@@download/IGVFFI4657XCCT.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/f12bd4d5-2849-48a7-b955-d970731562c5/IGVFFI4657XCCT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7315UXPS/",
"accession": "IGVFFI7315UXPS",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:48:04.795070+00:00",
"file_format": "fastq",
"file_size": 1063389396,
"href": "/sequence-files/IGVFFI7315UXPS/@@download/IGVFFI7315UXPS.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b21aff34-0568-44ba-8163-f411aea609fa/IGVFFI7315UXPS.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L007_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1742UGSX/",
"accession": "IGVFFI1742UGSX",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L007_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:48:08.353102+00:00",
"file_format": "fastq",
"file_size": 1863064152,
"href": "/sequence-files/IGVFFI1742UGSX/@@download/IGVFFI1742UGSX.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/aab5e1a7-b533-4999-834c-9a71fd79b4a9/IGVFFI1742UGSX.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L007_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1384REDL/",
"accession": "IGVFFI1384REDL",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L008_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:48:19.515986+00:00",
"file_format": "fastq",
"file_size": 1072986473,
"href": "/sequence-files/IGVFFI1384REDL/@@download/IGVFFI1384REDL.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/3644a8b5-1e7c-48bf-a2d2-bd88ac76085f/IGVFFI1384REDL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L008_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2461UOKL/",
"accession": "IGVFFI2461UOKL",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L008_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:48:15.702250+00:00",
"file_format": "fastq",
"file_size": 1878186966,
"href": "/sequence-files/IGVFFI2461UOKL/@@download/IGVFFI2461UOKL.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/6d582c18-d207-47ca-b01a-d8eaf6705fa7/IGVFFI2461UOKL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L008_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2540QBRT/",
"accession": "IGVFFI2540QBRT",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L005_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:47:36.173966+00:00",
"file_format": "fastq",
"file_size": 1006765355,
"href": "/sequence-files/IGVFFI2540QBRT/@@download/IGVFFI2540QBRT.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/cd4aeee9-f89d-49c8-be02-1cf9a59fcd22/IGVFFI2540QBRT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L005_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3117GKCO/",
"accession": "IGVFFI3117GKCO",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:47:57.014073+00:00",
"file_format": "fastq",
"file_size": 455368614,
"href": "/sequence-files/IGVFFI3117GKCO/@@download/IGVFFI3117GKCO.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/219b607d-3db1-4a7a-afaa-4487d862f772/IGVFFI3117GKCO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L007_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9151TOJR/",
"accession": "IGVFFI9151TOJR",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L005_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:47:32.688493+00:00",
"file_format": "fastq",
"file_size": 1774420730,
"href": "/sequence-files/IGVFFI9151TOJR/@@download/IGVFFI9151TOJR.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/286a2a7a-7a6b-4a62-bd7a-b6f7c6f74976/IGVFFI9151TOJR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L005_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9722YANB/",
"accession": "IGVFFI9722YANB",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L006_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:47:46.265306+00:00",
"file_format": "fastq",
"file_size": 1801539735,
"href": "/sequence-files/IGVFFI9722YANB/@@download/IGVFFI9722YANB.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/5a4677cb-5a00-46e5-a2f3-923ac39b5d95/IGVFFI9722YANB.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L006_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0633UEOG/",
"accession": "IGVFFI0633UEOG",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L008_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:48:12.206450+00:00",
"file_format": "fastq",
"file_size": 459125356,
"href": "/sequence-files/IGVFFI0633UEOG/@@download/IGVFFI0633UEOG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/c32a8dcf-b6d2-4e22-a6c8-73d0030f8ed1/IGVFFI0633UEOG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP020_G3_L003_P065_S21_L008_I1_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI7587TJLC/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS6715SKDT/",
"accession": "IGVFDS6715SKDT",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM9011XOSL/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM9011XOSL",
"aliases": [
"igvf:corces_multiplexedSample_RP020_G3"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (female, 82 years) substantia nigra tissue associated with cerebral amyloid angiopathy; Homo sapiens (male, 84 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T21:47:29.671021+00:00",
"summary": "single-nucleus ATAC-seq (10x multiome)",
"uuid": "75d13b5f-78dd-4366-846a-924a7e3e3da9"
}