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IGVFDS9457JYRY

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File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (female, 52 years) posterior cingulate gyrus tissue; Homo sapiens (male, 87 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
Protocols
Aliases
igvf:corces_measurementSet_RP023_G1_RNA
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Results (Illumina)

16 items
Read Names
fastq
reads
I1
1
2257GYLT3
1
517 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R2
1
Read 2
2257GYLT3
2
3.4 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R2
1
Read 2
2257GYLT3
3
3.4 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R2
1
Read 2
2257GYLT3
4
3.4 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
2257GYLT3
4
450 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
2257GYLT3
1
436 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R2
1
Read 2
2257GYLT3
1
3.3 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
2257GYLT3
3
444 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
2257GYLT3
2
449 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I1
1
2257GYLT3
2
532 MB
Ryan Corces, Gladstone Institute UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 52 years) posterior cingulate gyrus tissue; Homo sapiens (male, 87 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples

Donors

12 items
Aliases
  • igvf:corces_donor_BANN1851
male
Homo sapiens
  • igvf:corces_donor_BANN1506
male
Homo sapiens
  • igvf:corces_donor_BANN1311
male
Homo sapiens
  • igvf:corces_donor_BANN1644
male
Homo sapiens
  • igvf:corces_donor_BANN1839
female
Homo sapiens
  • igvf:corces_donor_BANN1957
male
Homo sapiens
  • igvf:corces_donor_BANN1814
male
Homo sapiens
  • igvf:corces_donor_BANN2118
female
Homo sapiens
  • igvf:corces_donor_BANN1756
male
Homo sapiens
  • igvf:corces_donor_BANN1737
female
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_RP023_G1_ATAC
Ryan Corces, Gladstone Institute UCSF