{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS9445YYVB/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS9445YYVB",
"aliases": [
"ali-mortazavi:B01_13H_nanopore"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000646](/sample-terms/NTR_0000646/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000646/"
},
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS9445YYVB](/measurement-sets/IGVFDS9445YYVB/) has sequence file(s): [IGVFFI6266KZFK](/sequence-files/IGVFFI6266KZFK/), [IGVFFI6580APRO](/sequence-files/IGVFFI6580APRO/), [IGVFFI0601VPZV](/sequence-files/IGVFFI0601VPZV/), [IGVFFI6915KRKK](/sequence-files/IGVFFI6915KRKK/), [IGVFFI3221ZEPY](/sequence-files/IGVFFI3221ZEPY/), [IGVFFI6314VEIY](/sequence-files/IGVFFI6314VEIY/), [IGVFFI5646MVPY](/sequence-files/IGVFFI5646MVPY/), [IGVFFI5790OVZY](/sequence-files/IGVFFI5790OVZY/), [IGVFFI6238QMGL](/sequence-files/IGVFFI6238QMGL/), [IGVFFI2783NHJJ](/sequence-files/IGVFFI2783NHJJ/), [IGVFFI3448XIOT](/sequence-files/IGVFFI3448XIOT/), [IGVFFI5938USSN](/sequence-files/IGVFFI5938USSN/), [IGVFFI7995EHHB](/sequence-files/IGVFFI7995EHHB/), [IGVFFI4230BKLF](/sequence-files/IGVFFI4230BKLF/), [IGVFFI3766OUJU](/sequence-files/IGVFFI3766OUJU/), [IGVFFI7378FTOR](/sequence-files/IGVFFI7378FTOR/), [IGVFFI1864QUQG](/sequence-files/IGVFFI1864QUQG/), [IGVFFI5928VRYG](/sequence-files/IGVFFI5928VRYG/), [IGVFFI9935UOGM](/sequence-files/IGVFFI9935UOGM/), [IGVFFI9066CRFG](/sequence-files/IGVFFI9066CRFG/) which do not have any `seqspecs`. Sequence files in a file set are expected to link to a sequence specification file.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS9445YYVB/"
}
]
},
"award": {
"@id": "/awards/HG012077/",
"component": "mapping",
"contact_pi": {
"@id": "/users/2c33e192-e815-4384-a220-72a0992cbe24/",
"title": "Ali Mortazavi"
},
"title": "Center for Mouse Genomic Variation at Single Cell Resolution"
},
"control_for": [],
"creation_timestamp": "2024-04-29T18:59:23.336294+00:00",
"donors": [
{
"@id": "/rodent-donors/IGVFDO6942KQBN/",
"accession": "IGVFDO6942KQBN",
"aliases": [
"ali-mortazavi:117_B6J_10M"
],
"sex": "male",
"status": "released",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4816HOFW/",
"accession": "IGVFDO4816HOFW",
"aliases": [
"ali-mortazavi:107_CASTJ_10M"
],
"sex": "male",
"status": "released",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8652OFEQ/",
"accession": "IGVFDO8652OFEQ",
"aliases": [
"ali-mortazavi:106_CASTJ_10F"
],
"sex": "female",
"status": "released",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9333ACQP/",
"accession": "IGVFDO9333ACQP",
"aliases": [
"ali-mortazavi:120_B6J_10F"
],
"sex": "female",
"status": "released",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1486RZJK/",
"accession": "IGVFDO1486RZJK",
"aliases": [
"ali-mortazavi:105_CASTJ_10M"
],
"sex": "male",
"status": "released",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7361LABA/",
"accession": "IGVFDO7361LABA",
"aliases": [
"ali-mortazavi:118_B6J_10F"
],
"sex": "female",
"status": "released",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0493VGMC/",
"accession": "IGVFDO0493VGMC",
"aliases": [
"ali-mortazavi:108_CASTJ_10F"
],
"sex": "female",
"status": "released",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3261YWHI/",
"accession": "IGVFDO3261YWHI",
"aliases": [
"ali-mortazavi:119_B6J_10M"
],
"sex": "male",
"status": "released",
"taxa": "Mus musculus"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI6266KZFK/",
"accession": "IGVFFI6266KZFK",
"aliases": [
"ali-mortazavi:igvfB01_13H_lig-ss_1.pod5"
],
"content_type": "Nanopore reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T16:57:02.198133+00:00",
"file_format": "pod5",
"file_size": 76805821544,
"href": "/sequence-files/IGVFFI6266KZFK/@@download/IGVFFI6266KZFK.pod5",
"s3_uri": "s3://igvf-files/2024/04/30/7919e030-51dd-4c53-a86a-29ee786dca87/IGVFFI6266KZFK.pod5",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_1.pod5",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6580APRO/",
"accession": "IGVFFI6580APRO",
"aliases": [
"ali-mortazavi:igvfB01_13H_lig-ss_2.pod5"
],
"content_type": "Nanopore reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T17:42:28.813470+00:00",
"file_format": "pod5",
"file_size": 78001300440,
"href": "/sequence-files/IGVFFI6580APRO/@@download/IGVFFI6580APRO.pod5",
"s3_uri": "s3://igvf-files/2024/04/30/b76fd105-4258-4b4f-8980-14abfc2ae5d5/IGVFFI6580APRO.pod5",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_2.pod5",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0601VPZV/",
"accession": "IGVFFI0601VPZV",
"aliases": [
"ali-mortazavi:igvfB01_13H_lig-ss_3.pod5"
],
"content_type": "Nanopore reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T18:27:28.640885+00:00",
"file_format": "pod5",
"file_size": 71895382352,
"href": "/sequence-files/IGVFFI0601VPZV/@@download/IGVFFI0601VPZV.pod5",
"s3_uri": "s3://igvf-files/2024/04/30/ddf1f78c-af28-4128-9a23-5e18341f41b3/IGVFFI0601VPZV.pod5",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_3.pod5",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6915KRKK/",
"accession": "IGVFFI6915KRKK",
"aliases": [
"ali-mortazavi:igvfB01_13H_lig-ss_4.pod5"
],
"content_type": "Nanopore reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T19:07:34.435323+00:00",
"file_format": "pod5",
"file_size": 67184475608,
"href": "/sequence-files/IGVFFI6915KRKK/@@download/IGVFFI6915KRKK.pod5",
"s3_uri": "s3://igvf-files/2024/04/30/7fbec93b-c8a8-40fc-ac7b-02087640cc7b/IGVFFI6915KRKK.pod5",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_4.pod5",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3221ZEPY/",
"accession": "IGVFFI3221ZEPY",
"aliases": [
"ali-mortazavi:igvfB01_13H_lig-ss_5.pod5"
],
"content_type": "Nanopore reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T19:44:37.671223+00:00",
"file_format": "pod5",
"file_size": 102699571712,
"href": "/sequence-files/IGVFFI3221ZEPY/@@download/IGVFFI3221ZEPY.pod5",
"s3_uri": "s3://igvf-files/2024/04/30/515a1541-8417-45bc-8fc5-e3451317661d/IGVFFI3221ZEPY.pod5",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_5.pod5",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6314VEIY/",
"accession": "IGVFFI6314VEIY",
"aliases": [
"ali-mortazavi:igvfB01_13H_lig-ss_6.pod5"
],
"content_type": "Nanopore reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T20:32:21.589283+00:00",
"file_format": "pod5",
"file_size": 50655238496,
"href": "/sequence-files/IGVFFI6314VEIY/@@download/IGVFFI6314VEIY.pod5",
"s3_uri": "s3://igvf-files/2024/04/30/d6c03fed-370b-4be6-8850-aba694c6bcfa/IGVFFI6314VEIY.pod5",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_6.pod5",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5646MVPY/",
"accession": "IGVFFI5646MVPY",
"aliases": [
"ali-mortazavi:igvfB01_13H_lig-ss_7.pod5"
],
"content_type": "Nanopore reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T20:59:15.107609+00:00",
"file_format": "pod5",
"file_size": 62049938720,
"href": "/sequence-files/IGVFFI5646MVPY/@@download/IGVFFI5646MVPY.pod5",
"s3_uri": "s3://igvf-files/2024/04/30/32959f9f-9126-4792-9038-534b910b1483/IGVFFI5646MVPY.pod5",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_7.pod5",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5790OVZY/",
"accession": "IGVFFI5790OVZY",
"aliases": [
"ali-mortazavi:igvfB01_13H_lig-ss_8.pod5"
],
"content_type": "Nanopore reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T21:31:31.976209+00:00",
"file_format": "pod5",
"file_size": 38733234744,
"href": "/sequence-files/IGVFFI5790OVZY/@@download/IGVFFI5790OVZY.pod5",
"s3_uri": "s3://igvf-files/2024/04/30/e7c34f86-ae28-4594-8d86-1e7b8e963125/IGVFFI5790OVZY.pod5",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_8.pod5",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6238QMGL/",
"accession": "IGVFFI6238QMGL",
"aliases": [
"ali-mortazavi:igvfB01_13H_lig-ss_9.pod5"
],
"content_type": "Nanopore reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T21:51:57.408640+00:00",
"file_format": "pod5",
"file_size": 23633192912,
"href": "/sequence-files/IGVFFI6238QMGL/@@download/IGVFFI6238QMGL.pod5",
"s3_uri": "s3://igvf-files/2024/04/30/5ca50503-c2a3-4fa2-a3e1-6c28ac1533b9/IGVFFI6238QMGL.pod5",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_9.pod5",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2783NHJJ/",
"accession": "IGVFFI2783NHJJ",
"aliases": [
"ali-mortazavi:igvfB01_13H_lig-ss_10.pod5"
],
"content_type": "Nanopore reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T22:04:32.941526+00:00",
"file_format": "pod5",
"file_size": 45618457768,
"href": "/sequence-files/IGVFFI2783NHJJ/@@download/IGVFFI2783NHJJ.pod5",
"s3_uri": "s3://igvf-files/2024/04/30/f851250d-171d-49c4-8583-7c775eaddb24/IGVFFI2783NHJJ.pod5",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_10.pod5",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3448XIOT/",
"accession": "IGVFFI3448XIOT",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T22:31:31.222794+00:00",
"file_format": "fastq",
"file_size": 5368004011,
"href": "/sequence-files/IGVFFI3448XIOT/@@download/IGVFFI3448XIOT.fastq.gz",
"s3_uri": "s3://igvf-files/2024/04/30/5571c675-1206-4ae8-9e1a-54853befd4e3/IGVFFI3448XIOT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5938USSN/",
"accession": "IGVFFI5938USSN",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T22:43:13.884395+00:00",
"file_format": "fastq",
"file_size": 3127898708,
"href": "/sequence-files/IGVFFI5938USSN/@@download/IGVFFI5938USSN.fastq.gz",
"s3_uri": "s3://igvf-files/2024/04/30/e7a44fbe-a9aa-4076-9dee-29bb81a789cb/IGVFFI5938USSN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_6.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7995EHHB/",
"accession": "IGVFFI7995EHHB",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T22:47:13.392070+00:00",
"file_format": "fastq",
"file_size": 2596335799,
"href": "/sequence-files/IGVFFI7995EHHB/@@download/IGVFFI7995EHHB.fastq.gz",
"s3_uri": "s3://igvf-files/2024/04/30/4a52ef06-a331-49ae-8ea6-c598e1b78c71/IGVFFI7995EHHB.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_8.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4230BKLF/",
"accession": "IGVFFI4230BKLF",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T22:48:38.113468+00:00",
"file_format": "fastq",
"file_size": 1504097791,
"href": "/sequence-files/IGVFFI4230BKLF/@@download/IGVFFI4230BKLF.fastq.gz",
"s3_uri": "s3://igvf-files/2024/04/30/1dbbd911-92ed-4619-bacd-769009b25847/IGVFFI4230BKLF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_9.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3766OUJU/",
"accession": "IGVFFI3766OUJU",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T22:49:29.276009+00:00",
"file_format": "fastq",
"file_size": 2929023953,
"href": "/sequence-files/IGVFFI3766OUJU/@@download/IGVFFI3766OUJU.fastq.gz",
"s3_uri": "s3://igvf-files/2024/04/30/b2357ec1-1b19-4513-8f65-b032f6f7902f/IGVFFI3766OUJU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_10.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7378FTOR/",
"accession": "IGVFFI7378FTOR",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T22:28:42.741383+00:00",
"file_format": "fastq",
"file_size": 5149868476,
"href": "/sequence-files/IGVFFI7378FTOR/@@download/IGVFFI7378FTOR.fastq.gz",
"s3_uri": "s3://igvf-files/2024/04/30/d2f8d65e-e063-4840-9487-a703ae93b593/IGVFFI7378FTOR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1864QUQG/",
"accession": "IGVFFI1864QUQG",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T22:34:27.034627+00:00",
"file_format": "fastq",
"file_size": 4633292400,
"href": "/sequence-files/IGVFFI1864QUQG/@@download/IGVFFI1864QUQG.fastq.gz",
"s3_uri": "s3://igvf-files/2024/04/30/2899a340-dd4e-4f3c-ac2a-aa8e53181317/IGVFFI1864QUQG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_3.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5928VRYG/",
"accession": "IGVFFI5928VRYG",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T22:36:55.286001+00:00",
"file_format": "fastq",
"file_size": 4640027718,
"href": "/sequence-files/IGVFFI5928VRYG/@@download/IGVFFI5928VRYG.fastq.gz",
"s3_uri": "s3://igvf-files/2024/04/30/45958b69-808f-4a69-8d0d-63eabeefc970/IGVFFI5928VRYG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_4.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9935UOGM/",
"accession": "IGVFFI9935UOGM",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T22:39:24.266997+00:00",
"file_format": "fastq",
"file_size": 7171474952,
"href": "/sequence-files/IGVFFI9935UOGM/@@download/IGVFFI9935UOGM.fastq.gz",
"s3_uri": "s3://igvf-files/2024/04/30/f9b54013-1457-4d05-93cc-0f72fc4852ee/IGVFFI9935UOGM.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_5.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9066CRFG/",
"accession": "IGVFFI9066CRFG",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2024-04-30T22:44:59.780712+00:00",
"file_format": "fastq",
"file_size": 4119036637,
"href": "/sequence-files/IGVFFI9066CRFG/@@download/IGVFFI9066CRFG.fastq.gz",
"s3_uri": "s3://igvf-files/2024/04/30/6bf1ad7f-3545-426f-8691-6e16053b1619/IGVFFI9066CRFG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008633/",
"status": "released",
"term_name": "ONT GridION X5"
},
"status": "released",
"submitted_file_name": "igvf_b01/nanopore/igvfb01_13H_lig-ss_7.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [
"/analysis-sets/IGVFDS3833XYEY/",
"/analysis-sets/IGVFDS5673HQEN/"
],
"lab": {
"@id": "/labs/ali-mortazavi/",
"title": "Ali Mortazavi, UCI"
},
"preferred_assay_title": "Parse SPLiT-seq",
"protocols": [
"https://www.protocols.io/view/evercode-wt-v2-2-1-eq2lyj9relx9/v1",
"https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-cryopreser-4r3l22y2pl1y/v1",
"https://www.protocols.io/view/ont-library-prep-for-split-seq-cdna-eq2lyj1xmlx9/v1"
],
"release_timestamp": "2024-05-08T23:38:43.612976+00:00",
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM2294BOOU/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM2294BOOU",
"aliases": [
"ali-mortazavi:subpool_b01_13h"
],
"classifications": [
"multiplexed sample"
],
"construct_library_sets": [],
"disease_terms": [],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/NTR_0000646/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "left cerebral cortex",
"term_name": "left cerebral cortex"
}
],
"status": "released",
"summary": "multiplexed sample: left cerebral cortex tissue, female, Mus musculus CASTJ (72 days); left cerebral cortex tissue, male, Mus musculus B6J (72 days); ... and 6 more samples",
"taxa": "Mus musculus",
"treatments": []
}
],
"schema_version": "23",
"sequencing_library_types": [
"mRNA enriched"
],
"status": "released",
"submitted_by": {
"@id": "/users/ebd1025b-e3ab-4e51-bfcd-1415f278281a/",
"title": "Diane Trout"
},
"submitted_files_timestamp": "2024-04-30T16:57:02.198133+00:00",
"summary": "Parse SPLiT-seq",
"uuid": "350328b1-3426-42c6-a4eb-de66913b84ee"
}