{
"@context": "/terms/",
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"FileSet",
"Item"
],
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"aliases": [
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],
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],
"status": "released",
"term_name": "single-cell RNA sequencing assay"
},
"audit": {
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{
"category": "missing publication",
"detail": "Measurement set [IGVFDS9400OGHB](/measurement-sets/IGVFDS9400OGHB/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS9400OGHB/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS9400OGHB](/measurement-sets/IGVFDS9400OGHB/) has in progress subobject tabular file [IGVFFI1312HTQX](/tabular-files/IGVFFI1312HTQX/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS9400OGHB/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS9400OGHB](/measurement-sets/IGVFDS9400OGHB/) has in progress subobject tabular file [IGVFFI0400MBIM](/tabular-files/IGVFFI0400MBIM/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS9400OGHB/"
},
{
"category": "missing publication",
"detail": "In vitro system [IGVFSM4346LXNW](/in-vitro-systems/IGVFSM4346LXNW/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM4346LXNW/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS9400OGHB](/measurement-sets/IGVFDS9400OGHB/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS9400OGHB/"
}
]
},
"award": {
"@id": "/awards/HG011986/",
"component": "mapping",
"contact_pi": {
"@id": "/users/33c6eb70-e143-4f77-9661-4b3905737daa/",
"title": "Jason Buenrostro"
},
"title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
},
"control_for": [],
"controlled_access": true,
"creation_timestamp": "2024-08-20T14:56:25.868632+00:00",
"data_use_limitation_summaries": [
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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"uuid": "c655315d-16f4-4209-b35e-81af347311dd"
}