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IGVFDS9261WYKR

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 207)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 595
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
R1
9089
Read 1
22LMVNLT4
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8609
Read 1
22LMVNLT4
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
3890
Read 1
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8993
Barcode index
22LMVNLT4
642 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8801
Read 1
22LMVNLT4
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8513
Read 2
22LMVNLT4
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8705
Read 1
22LMVNLT4
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8993
Read 1
22LMVNLT4
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8609
Barcode index
22LMVNLT4
669 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8705
Barcode index
22LMVNLT4
679 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 207)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 238
Jason Buenrostro, Broad