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IGVFDS9089INXN

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 173)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 402
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

33 items
Read Names
fastq
reads
R1
4077
Read 1
22523KLT3
376 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8922
Read 1
22LMVNLT4
205 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9114
Read 1
22LMVNLT4
203 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8922
Read 2
22LMVNLT4
195 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4041
Read 1
22523KLT3
374 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4041
Barcode index
22523KLT3
157 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8826
Read 1
22LMVNLT4
218 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9114
Barcode index
22LMVNLT4
121 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8634
Read 2
22LMVNLT4
211 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9018
Read 1
22LMVNLT4
213 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 173)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 357
Jason Buenrostro, Broad