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IGVFDS9080FVAM

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 180)
Protocols
Aliases
buenrostro-bernstein:scRNA Lib 366
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
R1
3978
Read 1
22523KLT3
691 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3942
Read 2
22523KLT3
310 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3978
Barcode index
22523KLT3
263 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3942
Barcode index
22523KLT3
246 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3978
Read 2
22523KLT3
337 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
3942
Read 1
22523KLT3
642 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 180)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:scATAC Lib 447
Jason Buenrostro, Broad