{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS8995MLTF/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS8995MLTF",
"aliases": [
"igvf:corces_measurementSet_RP004_G1_RNA"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [ef944fd3-8635-4e0f-bad8-48136e7c6408](/phenotypic-features/ef944fd3-8635-4e0f-bad8-48136e7c6408/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [cd2525eb-a90d-47c1-a053-cd3376cd23d1](/phenotypic-features/cd2525eb-a90d-47c1-a053-cd3376cd23d1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [1961d5fc-9987-47f0-8cdf-9dae2203185c](/phenotypic-features/1961d5fc-9987-47f0-8cdf-9dae2203185c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [d900f184-9bf7-4b9c-8d20-0d40c6b16435](/phenotypic-features/d900f184-9bf7-4b9c-8d20-0d40c6b16435/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [025a53bb-7c23-42cb-9752-3516f17f6187](/phenotypic-features/025a53bb-7c23-42cb-9752-3516f17f6187/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [93e7b543-5ab9-4cb4-8a10-9d9a7b950b6b](/phenotypic-features/93e7b543-5ab9-4cb4-8a10-9d9a7b950b6b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [416ac19b-be8b-4230-b781-ac2ad4d72ca0](/phenotypic-features/416ac19b-be8b-4230-b781-ac2ad4d72ca0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [ab7e4cfe-ea26-4525-ab85-dd11e60815e3](/phenotypic-features/ab7e4cfe-ea26-4525-ab85-dd11e60815e3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [d5720da2-f518-4f62-ab22-531e43e00201](/phenotypic-features/d5720da2-f518-4f62-ab22-531e43e00201/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [101b5ed8-c92e-433b-a591-b7bef11037b5](/phenotypic-features/101b5ed8-c92e-433b-a591-b7bef11037b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [b2b44f93-e621-43f7-80a5-3d1b73a794b2](/phenotypic-features/b2b44f93-e621-43f7-80a5-3d1b73a794b2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [8442786a-d708-482c-8764-201d14e47680](/phenotypic-features/8442786a-d708-482c-8764-201d14e47680/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [68fe3a71-6fc0-47e8-834c-794714585a7e](/phenotypic-features/68fe3a71-6fc0-47e8-834c-794714585a7e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [08a4bc6e-1d5d-46df-92f0-6085a35a75a7](/phenotypic-features/08a4bc6e-1d5d-46df-92f0-6085a35a75a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [e60abb08-e197-449b-8eb8-7172db9d3bac](/phenotypic-features/e60abb08-e197-449b-8eb8-7172db9d3bac/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [b6e61b30-fc06-4574-bff5-d55b926cf9f3](/phenotypic-features/b6e61b30-fc06-4574-bff5-d55b926cf9f3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [18771fd8-b1f4-4112-ac0d-363d231fec46](/phenotypic-features/18771fd8-b1f4-4112-ac0d-363d231fec46/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [a44604d0-0960-4f7f-a9a4-8399f31bfe01](/phenotypic-features/a44604d0-0960-4f7f-a9a4-8399f31bfe01/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [f38ae152-a841-4578-80ad-e603838eb149](/phenotypic-features/f38ae152-a841-4578-80ad-e603838eb149/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [03671afd-a812-4641-acd8-ab7ca518f1a5](/phenotypic-features/03671afd-a812-4641-acd8-ab7ca518f1a5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [07bba92c-e0e2-4492-9c8e-07b2afc7b700](/phenotypic-features/07bba92c-e0e2-4492-9c8e-07b2afc7b700/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2801HZMZ](/human-donors/IGVFDO2801HZMZ/) has in progress subobject phenotypic feature [de550bd8-340a-43ab-b069-231b217394e9](/phenotypic-features/de550bd8-340a-43ab-b069-231b217394e9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2801HZMZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2801HZMZ](/human-donors/IGVFDO2801HZMZ/) has in progress subobject phenotypic feature [3228a560-72b8-4229-a8ea-38bf217cb10b](/phenotypic-features/3228a560-72b8-4229-a8ea-38bf217cb10b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2801HZMZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2801HZMZ](/human-donors/IGVFDO2801HZMZ/) has in progress subobject phenotypic feature [d9c66628-fe43-4477-b26f-1c7c93881877](/phenotypic-features/d9c66628-fe43-4477-b26f-1c7c93881877/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2801HZMZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2801HZMZ](/human-donors/IGVFDO2801HZMZ/) has in progress subobject phenotypic feature [b3367270-478c-48c1-bd02-983a0a3b068d](/phenotypic-features/b3367270-478c-48c1-bd02-983a0a3b068d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2801HZMZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [720bd45c-2c73-4875-a5b5-e72cc71bb6d0](/phenotypic-features/720bd45c-2c73-4875-a5b5-e72cc71bb6d0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [12a9cbe8-866d-423e-b734-d6d39b31fb34](/phenotypic-features/12a9cbe8-866d-423e-b734-d6d39b31fb34/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [26dc3c60-2374-4916-ab7b-9f5bcb4ac64f](/phenotypic-features/26dc3c60-2374-4916-ab7b-9f5bcb4ac64f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [5893460c-131f-4b98-acd5-26997171dd9a](/phenotypic-features/5893460c-131f-4b98-acd5-26997171dd9a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [ecd9afa5-b266-4da4-87d2-368b418027c9](/phenotypic-features/ecd9afa5-b266-4da4-87d2-368b418027c9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [fd6110d1-a29e-4225-a5e6-27a7614bcdd7](/phenotypic-features/fd6110d1-a29e-4225-a5e6-27a7614bcdd7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [0cd59ebe-1db1-4f78-94b0-874fcf8fe239](/phenotypic-features/0cd59ebe-1db1-4f78-94b0-874fcf8fe239/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [66e32efb-7f85-4402-a04c-fece8128ee8e](/phenotypic-features/66e32efb-7f85-4402-a04c-fece8128ee8e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [5ec82856-d387-4727-9473-c60628ddce27](/phenotypic-features/5ec82856-d387-4727-9473-c60628ddce27/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [42c6269c-25ee-4326-b51c-086f9665bf75](/phenotypic-features/42c6269c-25ee-4326-b51c-086f9665bf75/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [a945aea6-1bca-4a51-a030-e44b27e81d2a](/phenotypic-features/a945aea6-1bca-4a51-a030-e44b27e81d2a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [30a806f6-8eeb-410a-a2db-f5b64f11b294](/phenotypic-features/30a806f6-8eeb-410a-a2db-f5b64f11b294/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [f57d3e32-48bd-4719-8d01-68046dd4734c](/phenotypic-features/f57d3e32-48bd-4719-8d01-68046dd4734c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [22131022-5110-4ae2-91a6-98c3dcc35ee0](/phenotypic-features/22131022-5110-4ae2-91a6-98c3dcc35ee0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [e4feb5fc-ff23-4699-a4d2-620d59dcdd3e](/phenotypic-features/e4feb5fc-ff23-4699-a4d2-620d59dcdd3e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [8e88e2ab-61fc-482b-a4b5-416755a847bc](/phenotypic-features/8e88e2ab-61fc-482b-a4b5-416755a847bc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0966KXTA](/human-donors/IGVFDO0966KXTA/) has in progress subobject phenotypic feature [6a401974-b8df-482a-b734-fab7683a6f39](/phenotypic-features/6a401974-b8df-482a-b734-fab7683a6f39/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0966KXTA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0966KXTA](/human-donors/IGVFDO0966KXTA/) has in progress subobject phenotypic feature [ae18045e-aea2-45bb-b765-de3f2b965b59](/phenotypic-features/ae18045e-aea2-45bb-b765-de3f2b965b59/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0966KXTA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0966KXTA](/human-donors/IGVFDO0966KXTA/) has in progress subobject phenotypic feature [d72f23fa-592d-4693-ab03-1160f89e3d5b](/phenotypic-features/d72f23fa-592d-4693-ab03-1160f89e3d5b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0966KXTA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0966KXTA](/human-donors/IGVFDO0966KXTA/) has in progress subobject phenotypic feature [a5b8945b-e2c3-49f2-96d9-e9c91bd1fe1c](/phenotypic-features/a5b8945b-e2c3-49f2-96d9-e9c91bd1fe1c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0966KXTA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9462VNBA](/human-donors/IGVFDO9462VNBA/) has in progress subobject phenotypic feature [d1009484-c54c-40e3-87bb-a68865d05f89](/phenotypic-features/d1009484-c54c-40e3-87bb-a68865d05f89/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9462VNBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9462VNBA](/human-donors/IGVFDO9462VNBA/) has in progress subobject phenotypic feature [3ed79f31-4afe-4100-8438-02f4bdb3d374](/phenotypic-features/3ed79f31-4afe-4100-8438-02f4bdb3d374/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9462VNBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9462VNBA](/human-donors/IGVFDO9462VNBA/) has in progress subobject phenotypic feature [0c82c2b1-5385-4458-bec9-677cbe9f7b7c](/phenotypic-features/0c82c2b1-5385-4458-bec9-677cbe9f7b7c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9462VNBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9462VNBA](/human-donors/IGVFDO9462VNBA/) has in progress subobject phenotypic feature [6b26ae98-6bc9-4d3d-8eac-a4a43ffac26e](/phenotypic-features/6b26ae98-6bc9-4d3d-8eac-a4a43ffac26e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9462VNBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9462VNBA](/human-donors/IGVFDO9462VNBA/) has in progress subobject phenotypic feature [c1687319-f006-4068-a6d1-77e9c23b3f63](/phenotypic-features/c1687319-f006-4068-a6d1-77e9c23b3f63/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9462VNBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9462VNBA](/human-donors/IGVFDO9462VNBA/) has in progress subobject phenotypic feature [ae331306-20af-4bbc-99eb-2319d63f2c2e](/phenotypic-features/ae331306-20af-4bbc-99eb-2319d63f2c2e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9462VNBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [6996673c-1993-4682-87ae-6d3968ab4eba](/phenotypic-features/6996673c-1993-4682-87ae-6d3968ab4eba/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [de15fdf8-d7dc-4a9e-9fcd-d5bc83119b19](/phenotypic-features/de15fdf8-d7dc-4a9e-9fcd-d5bc83119b19/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [201dcd5e-a9ec-49ae-88a5-7f5f59f4d6dc](/phenotypic-features/201dcd5e-a9ec-49ae-88a5-7f5f59f4d6dc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [33c7729b-5ddf-4b58-bd09-9717dac5eb61](/phenotypic-features/33c7729b-5ddf-4b58-bd09-9717dac5eb61/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [7007fd27-1b94-42fb-a2cb-5a579dcbbfc2](/phenotypic-features/7007fd27-1b94-42fb-a2cb-5a579dcbbfc2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [2770d2df-cfa4-4078-9bd1-51ee1d3c62b4](/phenotypic-features/2770d2df-cfa4-4078-9bd1-51ee1d3c62b4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [388e6c7d-aa54-4b94-b6d4-d0096dc58b8d](/phenotypic-features/388e6c7d-aa54-4b94-b6d4-d0096dc58b8d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [140f7109-4076-4532-90af-d8a061e38b9e](/phenotypic-features/140f7109-4076-4532-90af-d8a061e38b9e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [73ee2a00-02ce-4945-952c-0341041304f7](/phenotypic-features/73ee2a00-02ce-4945-952c-0341041304f7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [8bd56b29-c1df-475c-b64c-a8763069139d](/phenotypic-features/8bd56b29-c1df-475c-b64c-a8763069139d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [739c8fdc-61dc-4501-a392-adee0ae4fc0a](/phenotypic-features/739c8fdc-61dc-4501-a392-adee0ae4fc0a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [73238fee-a419-42c3-b590-6ce878f036a7](/phenotypic-features/73238fee-a419-42c3-b590-6ce878f036a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS8995MLTF](/measurement-sets/IGVFDS8995MLTF/) has sequence file(s): [IGVFFI3945BBGB](/sequence-files/IGVFFI3945BBGB/), [IGVFFI7025YJZF](/sequence-files/IGVFFI7025YJZF/), [IGVFFI8889RTXX](/sequence-files/IGVFFI8889RTXX/), [IGVFFI3392HVZK](/sequence-files/IGVFFI3392HVZK/), [IGVFFI3509AKME](/sequence-files/IGVFFI3509AKME/), [IGVFFI9884FXMD](/sequence-files/IGVFFI9884FXMD/), [IGVFFI5065QBEP](/sequence-files/IGVFFI5065QBEP/), [IGVFFI1279LWKJ](/sequence-files/IGVFFI1279LWKJ/), [IGVFFI4937HRUD](/sequence-files/IGVFFI4937HRUD/), [IGVFFI3034OCSR](/sequence-files/IGVFFI3034OCSR/), [IGVFFI4343DBOR](/sequence-files/IGVFFI4343DBOR/), [IGVFFI7772UQIM](/sequence-files/IGVFFI7772UQIM/), [IGVFFI8221GBIT](/sequence-files/IGVFFI8221GBIT/), [IGVFFI3841CEZB](/sequence-files/IGVFFI3841CEZB/), [IGVFFI6898SYBY](/sequence-files/IGVFFI6898SYBY/), [IGVFFI4793AVMP](/sequence-files/IGVFFI4793AVMP/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS8995MLTF/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS8995MLTF](/measurement-sets/IGVFDS8995MLTF/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS8995MLTF/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS8995MLTF](/measurement-sets/IGVFDS8995MLTF/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS8995MLTF/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T21:40:37.876224+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO4191KJBR/",
"accession": "IGVFDO4191KJBR",
"aliases": [
"igvf:corces_donor_BANN0129"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8344LUQZ/",
"accession": "IGVFDO8344LUQZ",
"aliases": [
"igvf:corces_donor_BANN0621"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1469WVVS/",
"accession": "IGVFDO1469WVVS",
"aliases": [
"igvf:corces_donor_BANN1063"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9028PIDF/",
"accession": "IGVFDO9028PIDF",
"aliases": [
"igvf:corces_donor_BANN1637"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3971UIZC/",
"accession": "IGVFDO3971UIZC",
"aliases": [
"igvf:corces_donor_BANN0217"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3911JQLE/",
"accession": "IGVFDO3911JQLE",
"aliases": [
"igvf:corces_donor_BANN1412"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2028IGVN/",
"accession": "IGVFDO2028IGVN",
"aliases": [
"igvf:corces_donor_BANN1256"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6837RJUQ/",
"accession": "IGVFDO6837RJUQ",
"aliases": [
"igvf:corces_donor_BANN1201"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0966KXTA/",
"accession": "IGVFDO0966KXTA",
"aliases": [
"igvf:corces_donor_BANN0138"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2801HZMZ/",
"accession": "IGVFDO2801HZMZ",
"aliases": [
"igvf:corces_donor_BANN1028"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6513APBX/",
"accession": "IGVFDO6513APBX",
"aliases": [
"igvf:corces_donor_BANN0210"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9462VNBA/",
"accession": "IGVFDO9462VNBA",
"aliases": [
"igvf:corces_donor_BANN2003"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI3945BBGB/",
"accession": "IGVFFI3945BBGB",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L005_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:09.913883+00:00",
"file_format": "fastq",
"file_size": 312235850,
"href": "/sequence-files/IGVFFI3945BBGB/@@download/IGVFFI3945BBGB.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/eeeee374-89e0-47cd-bcf7-e72e44168b4e/IGVFFI3945BBGB.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L005_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7025YJZF/",
"accession": "IGVFFI7025YJZF",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L005_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:21.039886+00:00",
"file_format": "fastq",
"file_size": 2328065164,
"href": "/sequence-files/IGVFFI7025YJZF/@@download/IGVFFI7025YJZF.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b0e6b08b-48d1-4c9c-ab89-116956b637a8/IGVFFI7025YJZF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L005_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8889RTXX/",
"accession": "IGVFFI8889RTXX",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L005_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:17.102312+00:00",
"file_format": "fastq",
"file_size": 1094939394,
"href": "/sequence-files/IGVFFI8889RTXX/@@download/IGVFFI8889RTXX.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/bcb602b7-2f9e-43a6-bc76-5df874f26bcd/IGVFFI8889RTXX.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L005_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3392HVZK/",
"accession": "IGVFFI3392HVZK",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L007_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:39.225586+00:00",
"file_format": "fastq",
"file_size": 343583756,
"href": "/sequence-files/IGVFFI3392HVZK/@@download/IGVFFI3392HVZK.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/64241521-556d-4447-900f-8cd7c7ea0a8a/IGVFFI3392HVZK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L007_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3509AKME/",
"accession": "IGVFFI3509AKME",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L006_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:27.291532+00:00",
"file_format": "fastq",
"file_size": 355645978,
"href": "/sequence-files/IGVFFI3509AKME/@@download/IGVFFI3509AKME.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/1a68874e-2432-406d-b070-dfbaa68c996c/IGVFFI3509AKME.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L006_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9884FXMD/",
"accession": "IGVFFI9884FXMD",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L006_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:24.563357+00:00",
"file_format": "fastq",
"file_size": 306006009,
"href": "/sequence-files/IGVFFI9884FXMD/@@download/IGVFFI9884FXMD.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/60c9a19b-59f8-4b6d-89a4-c3104a2cdea9/IGVFFI9884FXMD.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L006_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5065QBEP/",
"accession": "IGVFFI5065QBEP",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L008_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:48.554090+00:00",
"file_format": "fastq",
"file_size": 280136164,
"href": "/sequence-files/IGVFFI5065QBEP/@@download/IGVFFI5065QBEP.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/0f283230-29da-4417-8c71-588a7cbb79c9/IGVFFI5065QBEP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L008_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1279LWKJ/",
"accession": "IGVFFI1279LWKJ",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L008_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:58.719792+00:00",
"file_format": "fastq",
"file_size": 2096584991,
"href": "/sequence-files/IGVFFI1279LWKJ/@@download/IGVFFI1279LWKJ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/64a3fe33-0910-42c1-8940-4e6d9305b0fe/IGVFFI1279LWKJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L008_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4937HRUD/",
"accession": "IGVFFI4937HRUD",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L008_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:52.658269+00:00",
"file_format": "fastq",
"file_size": 330039878,
"href": "/sequence-files/IGVFFI4937HRUD/@@download/IGVFFI4937HRUD.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/f602f8c6-f7c9-4464-a243-579c734d0f9e/IGVFFI4937HRUD.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L008_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3034OCSR/",
"accession": "IGVFFI3034OCSR",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L005_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:12.984872+00:00",
"file_format": "fastq",
"file_size": 362377274,
"href": "/sequence-files/IGVFFI3034OCSR/@@download/IGVFFI3034OCSR.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/09417617-348a-4540-bc40-b18564601ae1/IGVFFI3034OCSR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L005_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4343DBOR/",
"accession": "IGVFFI4343DBOR",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L006_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:29.480970+00:00",
"file_format": "fastq",
"file_size": 1073382655,
"href": "/sequence-files/IGVFFI4343DBOR/@@download/IGVFFI4343DBOR.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/6e976d1b-ac70-42de-b05a-c6041ea688af/IGVFFI4343DBOR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L006_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7772UQIM/",
"accession": "IGVFFI7772UQIM",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L006_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:32.810114+00:00",
"file_format": "fastq",
"file_size": 2284088151,
"href": "/sequence-files/IGVFFI7772UQIM/@@download/IGVFFI7772UQIM.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b071777e-1db0-47de-9948-62d87ad86ede/IGVFFI7772UQIM.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L006_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8221GBIT/",
"accession": "IGVFFI8221GBIT",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:41.644038+00:00",
"file_format": "fastq",
"file_size": 1028328858,
"href": "/sequence-files/IGVFFI8221GBIT/@@download/IGVFFI8221GBIT.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b6cac597-352a-4f1f-a43f-f06126f6f59d/IGVFFI8221GBIT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3841CEZB/",
"accession": "IGVFFI3841CEZB",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:36.468467+00:00",
"file_format": "fastq",
"file_size": 292299911,
"href": "/sequence-files/IGVFFI3841CEZB/@@download/IGVFFI3841CEZB.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/5c2d370a-c2a3-4f51-a9fa-1d07c5168de3/IGVFFI3841CEZB.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L007_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6898SYBY/",
"accession": "IGVFFI6898SYBY",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L008_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:55.851706+00:00",
"file_format": "fastq",
"file_size": 984254394,
"href": "/sequence-files/IGVFFI6898SYBY/@@download/IGVFFI6898SYBY.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/98f69bb0-639d-4128-ba4d-1302745b2259/IGVFFI6898SYBY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L008_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4793AVMP/",
"accession": "IGVFFI4793AVMP",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP004_G1_P054_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:12:45.248519+00:00",
"file_format": "fastq",
"file_size": 2187514291,
"href": "/sequence-files/IGVFFI4793AVMP/@@download/IGVFFI4793AVMP.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/aff69827-ff72-4b26-a2cd-d7ed6032766e/IGVFFI4793AVMP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP004_G1_L001_P054_S28_L007_R2_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI8751YQRY/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS8426LZVO/",
"accession": "IGVFDS8426LZVO",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM5141FLXJ/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM5141FLXJ",
"aliases": [
"igvf:corces_multiplexedSample_RP004_G1"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
},
{
"@id": "/phenotype-terms/MONDO_0004975/",
"status": "released",
"term_name": "Alzheimer disease"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease; Homo sapiens (male, 70 years) posterior cingulate gyrus tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T15:12:09.913883+00:00",
"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "dc9934ca-ca54-4cec-bf29-241deda7a204"
}