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INDEXED
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MeasurementSet
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IGVFDS8972AAEC
IGVFDS8972AAEC
released
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Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 9 days
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C29_day9
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0276ZSDM
fastq
reads
R2
2
Illumina NovaSeq X
8
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI1293OYYC
fastq
reads
R2
2
Illumina NovaSeq X
4
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI1609MKDA
fastq
reads
R2
2
Illumina NovaSeq X
2
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI3720NTQI
fastq
reads
R1
1
Illumina NovaSeq X
2
2.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI4420FOXI
fastq
reads
R2
2
Illumina NovaSeq X
6
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI4523MNOB
fastq
reads
R2
2
Illumina NovaSeq X
7
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI4606CDOJ
fastq
reads
R1
1
Illumina NovaSeq X
6
2.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI4621AOAF
fastq
reads
R1
1
Illumina NovaSeq X
7
2.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI4889QRGW
fastq
reads
R2
2
Illumina NovaSeq X
3
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI5997SFNS
fastq
reads
R2
2
Illumina NovaSeq X
5
2.6 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM9479KVHK
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 9 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO3754NCBP
chongyuan-luo:C29
unspecified
Homo sapiens