IGVFDS8970MJXV

released

GRU

File Set Type

experimental data

Summary

single-cell ATAC-seq (SHARE-seq)

Assay Term

single-cell ATAC-seq

Sample Summaries

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 172)

Protocols

https://www.protocols.io/view/share-seq-protocol-v2-2-di3y4gpw

Aliases

buenrostro-bernstein:scATAC Lib 397

Attribution

Jason Buenrostro, Broad

(

HG011986 — Jason Buenrostro

)

Sequencing Results (Illumina)

12 items

Read Names

IGVFFI0419WXBK

fastq

reads

3904

IGVFFI0262FEMO

Illumina NovaSeq X

22523KLT3

1.1 GB

Jason Buenrostro, Broad

validated

IGVFFI4663QWNI

fastq

reads

4374

IGVFFI9758KWPJ

Illumina NovaSeq 6000

H75F7DSX5

2.8 GB

Jason Buenrostro, Broad

validated

IGVFFI5618UUYQ

fastq

reads

3904

IGVFFI0262FEMO

Illumina NovaSeq X

22523KLT3

529 MB

Jason Buenrostro, Broad

validated

IGVFFI5933VRFJ

fastq

reads

4374

IGVFFI9758KWPJ

Illumina NovaSeq 6000

H75F7DSX5

1.3 GB

Jason Buenrostro, Broad

validated

IGVFFI6052JGNQ

fastq

reads

4338

IGVFFI0444BIGS

Illumina NovaSeq 6000

H75F7DSX5

3.0 GB

Jason Buenrostro, Broad

validated

IGVFFI6556GRSH

fastq

reads

3904

Barcode index

IGVFFI0262FEMO

Illumina NovaSeq X

22523KLT3

447 MB

Jason Buenrostro, Broad

validated

IGVFFI6624CJCN

fastq

reads

4338

IGVFFI0444BIGS

Illumina NovaSeq 6000

H75F7DSX5

1.4 GB

Jason Buenrostro, Broad

validated

IGVFFI6700WGGF

fastq

reads

3868

Barcode index

IGVFFI2632XGWV

Illumina NovaSeq X

22523KLT3

446 MB

Jason Buenrostro, Broad

validated

IGVFFI8074KVNK

fastq

reads

4374

Barcode index

IGVFFI9758KWPJ

Illumina NovaSeq 6000

H75F7DSX5

997 MB

Jason Buenrostro, Broad

validated

IGVFFI8283RCMF

fastq

reads

3868

IGVFFI2632XGWV

Illumina NovaSeq X

22523KLT3

1.1 GB

Jason Buenrostro, Broad

validated

Samples

1 item

Accession

Type

Sample Terms

Associated Construct Library Sets

Summary

IGVFSM7032AAKE

InVitroSystem

induced pluripotent stem cell

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 172)