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IGVFDS8782BKBI

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens (male, 37 years) bone marrow cell (cellular sub pool: SS-PKR 7)
Protocols
Aliases
bradley-bernstein:scATAC Lib 42
buenrostro-bernstein:scATAC Lib 42
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

16 items
Read Names
fastq
reads
R1
2319
596 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1457
8.7 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2607
593 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1649
8.8 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1649
18 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1553
20 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2319
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1745
9.3 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1745
20 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1553
9.3 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
PrimaryCell
Homo sapiens (male, 37 years) bone marrow cell (cellular sub pool: SS-PKR 7)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1507
  • buenrostro-bernstein:Donor 1507
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 42
  • buenrostro-bernstein:scRNA Lib 42
Jason Buenrostro, Broad