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MeasurementSet
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IGVFDS8732GYRE
IGVFDS8732GYRE
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This object is in preview status. Metadata is subject to change until this object is released.
File Set Type
experimental data
Summary
10x multiome with scMito-seq
Assay Term
single-cell ATAC-seq
Sample Summaries
Homo sapiens (female, 22 years) peripheral blood mononuclear cell
Protocols
https://www.protocols.io/view/mtscmultiome-atac-gex-protocol-d554888w
Aliases
leif-ludwig:measurement2305510014_scATAC
Attribution
Leif Ludwig, MDC
(
HG012076
—
Ansuman Satpathy
)
Sequencing Results (Illumina)
24 items
1
2
3
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0177AXVZ
fastq
reads
R1
1
Read 1
IGVFFI0613CXPP
Illumina NovaSeq X Plus
22VLC5LT3
1
3.5 GB
Leif Ludwig, MDC
validated
IGVFFI0341KJPB
fastq
reads
R1
1
Read 1
IGVFFI2412RPSY
Illumina NovaSeq X Plus
22VLC5LT3
2
3.5 GB
Leif Ludwig, MDC
validated
IGVFFI1150EYPW
fastq
reads
R2
1
Barcode index
IGVFFI7602VMZO
Illumina NovaSeq X Plus
22VLC5LT3
8
1.1 GB
Leif Ludwig, MDC
validated
IGVFFI1300UTWJ
fastq
reads
R3
1
Read 2
IGVFFI2259XHYL
Illumina NovaSeq X Plus
22VLC5LT3
7
3.4 GB
Leif Ludwig, MDC
validated
IGVFFI1609QFZZ
fastq
reads
R2
1
Barcode index
IGVFFI2259XHYL
Illumina NovaSeq X Plus
22VLC5LT3
7
1.1 GB
Leif Ludwig, MDC
validated
IGVFFI1769UTAM
fastq
reads
R2
1
Barcode index
IGVFFI5810JUAP
Illumina NovaSeq X Plus
22VLC5LT3
4
1.1 GB
Leif Ludwig, MDC
validated
IGVFFI2028EBIV
fastq
reads
R1
1
Read 1
IGVFFI8272FGBI
Illumina NovaSeq X Plus
22VLC5LT3
6
3.5 GB
Leif Ludwig, MDC
validated
IGVFFI2157XOKZ
fastq
reads
R3
1
Read 2
IGVFFI2412RPSY
Illumina NovaSeq X Plus
22VLC5LT3
2
3.5 GB
Leif Ludwig, MDC
validated
IGVFFI2276HIXW
fastq
reads
R2
1
Barcode index
IGVFFI0613CXPP
Illumina NovaSeq X Plus
22VLC5LT3
1
1.1 GB
Leif Ludwig, MDC
validated
IGVFFI2476XQKF
fastq
reads
R1
1
Read 1
IGVFFI2259XHYL
Illumina NovaSeq X Plus
22VLC5LT3
7
3.4 GB
Leif Ludwig, MDC
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM5838MXOZ
PrimaryCell
peripheral blood mononuclear cell
Homo sapiens (female, 22 years) peripheral blood mononuclear cell
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO9086BEYU
leif-ludwig:donor2305510014
female
Homo sapiens
Related Multiome Datasets
1 item
Accession
Type
Summary
Aliases
Lab
IGVFDS1577JVMN
MeasurementSet
10x multiome with scMito-seq
leif-ludwig:measurement2305510014_scRNA
Leif Ludwig, MDC