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INDEXED
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MeasurementSet
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IGVFDS8729LTAJ
IGVFDS8729LTAJ
released
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File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens (36 years) fibroblast cell
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C39_day0
Submitter Comment
This file set previously linked to the Sample /in-vitro-systems/IGVFSM8158AYJT/.
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0229OWYG
fastq
reads
R2
1
Illumina NovaSeq X
6
3.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI0499KNHL
fastq
reads
R1
1
Illumina NovaSeq X
7
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI0823FVLU
fastq
reads
R2
1
Illumina NovaSeq X
8
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI1638USRV
fastq
reads
R2
1
Illumina NovaSeq X
4
3.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI1754LETO
fastq
reads
R2
1
Illumina NovaSeq X
5
3.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI2965VAMY
fastq
reads
R1
1
Illumina NovaSeq X
2
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI3372TIQC
fastq
reads
R2
1
Illumina NovaSeq X
3
3.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI3545HELW
fastq
reads
R1
1
Illumina NovaSeq X
8
3.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI3997WWTW
fastq
reads
R2
1
Illumina NovaSeq X
1
3.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI4842RODY
fastq
reads
R1
1
Illumina NovaSeq X
5
3.4 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM0864UILK
PrimaryCell
fibroblast
Homo sapiens (36 years) fibroblast cell
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO4068JJIT
chongyuan-luo:C39
unspecified
Homo sapiens