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IGVFDS8727DJPO

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 178)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 435
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

39 items
Read Names
fastq
reads
R1
8655
Read 1
22LMVNLT4
10 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8943
Read 2
22LMVNLT4
9.3 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8655
Read 2
22LMVNLT4
9.9 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
971
Barcode index
22773CLT3
365 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8559
Read 2
22LMVNLT4
9.7 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8463
Read 1
22LMVNLT4
11 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9135
Read 1
22LMVNLT4
9.8 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1055
Read 2
22773CLT3
404 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1013
Read 2
22773CLT3
411 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
929
Barcode index
22773CLT3
361 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 178)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 426
Jason Buenrostro, Broad