{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS8707VRYD/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS8707VRYD",
"aliases": [
"igvf:corces_measurementSet_X044_G2_RNA"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [fff30f45-9273-47a0-847f-0619e27db9f1](/phenotypic-features/fff30f45-9273-47a0-847f-0619e27db9f1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [e469ed8e-b7b3-43ab-911f-20f855038419](/phenotypic-features/e469ed8e-b7b3-43ab-911f-20f855038419/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [f002bd57-9c69-46f5-baeb-02ef36f0ae95](/phenotypic-features/f002bd57-9c69-46f5-baeb-02ef36f0ae95/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [99530794-7cba-40b4-a9d0-816f682a6751](/phenotypic-features/99530794-7cba-40b4-a9d0-816f682a6751/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [b9914545-281c-4c85-add2-46440dec3556](/phenotypic-features/b9914545-281c-4c85-add2-46440dec3556/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [457ba560-b6d1-4bea-b7fa-c043ca79ab7b](/phenotypic-features/457ba560-b6d1-4bea-b7fa-c043ca79ab7b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [f57b6265-94b7-4979-be4c-73ef23b5faba](/phenotypic-features/f57b6265-94b7-4979-be4c-73ef23b5faba/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [5d86271f-e200-458e-b626-d45775c1f778](/phenotypic-features/5d86271f-e200-458e-b626-d45775c1f778/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [633cb08c-78bd-4268-b5d8-b893a02d26f8](/phenotypic-features/633cb08c-78bd-4268-b5d8-b893a02d26f8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [0165d0f4-b610-4164-9bc3-08dc74af02b3](/phenotypic-features/0165d0f4-b610-4164-9bc3-08dc74af02b3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [3a8f2048-d423-49dc-872f-a2d52489895c](/phenotypic-features/3a8f2048-d423-49dc-872f-a2d52489895c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [87d488ba-ef89-494c-8024-bee2b8535732](/phenotypic-features/87d488ba-ef89-494c-8024-bee2b8535732/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [739c8fdc-61dc-4501-a392-adee0ae4fc0a](/phenotypic-features/739c8fdc-61dc-4501-a392-adee0ae4fc0a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [73238fee-a419-42c3-b590-6ce878f036a7](/phenotypic-features/73238fee-a419-42c3-b590-6ce878f036a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [73ee2a00-02ce-4945-952c-0341041304f7](/phenotypic-features/73ee2a00-02ce-4945-952c-0341041304f7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [8bd56b29-c1df-475c-b64c-a8763069139d](/phenotypic-features/8bd56b29-c1df-475c-b64c-a8763069139d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [388e6c7d-aa54-4b94-b6d4-d0096dc58b8d](/phenotypic-features/388e6c7d-aa54-4b94-b6d4-d0096dc58b8d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6837RJUQ](/human-donors/IGVFDO6837RJUQ/) has in progress subobject phenotypic feature [140f7109-4076-4532-90af-d8a061e38b9e](/phenotypic-features/140f7109-4076-4532-90af-d8a061e38b9e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6837RJUQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7606UOXI](/human-donors/IGVFDO7606UOXI/) has in progress subobject phenotypic feature [166bde04-bc62-42b7-9b0e-31775e50d7dd](/phenotypic-features/166bde04-bc62-42b7-9b0e-31775e50d7dd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7606UOXI/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7606UOXI](/human-donors/IGVFDO7606UOXI/) has in progress subobject phenotypic feature [acfae2e4-6c85-46e0-825e-6fde6ec88f0a](/phenotypic-features/acfae2e4-6c85-46e0-825e-6fde6ec88f0a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7606UOXI/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7606UOXI](/human-donors/IGVFDO7606UOXI/) has in progress subobject phenotypic feature [bb1e3012-380e-4519-9238-8839d272804c](/phenotypic-features/bb1e3012-380e-4519-9238-8839d272804c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7606UOXI/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7606UOXI](/human-donors/IGVFDO7606UOXI/) has in progress subobject phenotypic feature [f7b2d235-fce3-4250-8abf-9a226d1f190f](/phenotypic-features/f7b2d235-fce3-4250-8abf-9a226d1f190f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7606UOXI/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7606UOXI](/human-donors/IGVFDO7606UOXI/) has in progress subobject phenotypic feature [79174baf-cf63-4144-9cc8-050157e38fc4](/phenotypic-features/79174baf-cf63-4144-9cc8-050157e38fc4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7606UOXI/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7754VJKM](/human-donors/IGVFDO7754VJKM/) has in progress subobject phenotypic feature [a27c1605-198a-40ed-9af5-e16f902dcf87](/phenotypic-features/a27c1605-198a-40ed-9af5-e16f902dcf87/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7754VJKM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7754VJKM](/human-donors/IGVFDO7754VJKM/) has in progress subobject phenotypic feature [3591f078-85a7-42cd-bcf1-34195019c048](/phenotypic-features/3591f078-85a7-42cd-bcf1-34195019c048/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7754VJKM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7754VJKM](/human-donors/IGVFDO7754VJKM/) has in progress subobject phenotypic feature [2684a323-af23-48b9-b2ae-7252b9924672](/phenotypic-features/2684a323-af23-48b9-b2ae-7252b9924672/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7754VJKM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7754VJKM](/human-donors/IGVFDO7754VJKM/) has in progress subobject phenotypic feature [d4c090b4-2024-4a9b-8898-a15945597fdd](/phenotypic-features/d4c090b4-2024-4a9b-8898-a15945597fdd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7754VJKM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7754VJKM](/human-donors/IGVFDO7754VJKM/) has in progress subobject phenotypic feature [c84b99ad-816e-42a4-b195-b58aba45e6e0](/phenotypic-features/c84b99ad-816e-42a4-b195-b58aba45e6e0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7754VJKM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7754VJKM](/human-donors/IGVFDO7754VJKM/) has in progress subobject phenotypic feature [7e56d341-7311-4c86-a7ab-923358072a1e](/phenotypic-features/7e56d341-7311-4c86-a7ab-923358072a1e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7754VJKM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [d033da7a-d05d-493a-b14b-e92da476513e](/phenotypic-features/d033da7a-d05d-493a-b14b-e92da476513e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [223f8656-33f6-4df2-a0ef-f2d3acc4b93f](/phenotypic-features/223f8656-33f6-4df2-a0ef-f2d3acc4b93f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [1967f945-b778-40e9-b9ee-268d7dd12697](/phenotypic-features/1967f945-b778-40e9-b9ee-268d7dd12697/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [c0600e19-9e31-48ca-8137-d2ebb5c3020f](/phenotypic-features/c0600e19-9e31-48ca-8137-d2ebb5c3020f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [20ecf55a-d575-4751-9a64-bf523a4d2f6a](/phenotypic-features/20ecf55a-d575-4751-9a64-bf523a4d2f6a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [6a9ef7bb-d019-40c0-9bec-d9729b35bdbd](/phenotypic-features/6a9ef7bb-d019-40c0-9bec-d9729b35bdbd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [ab7e4cfe-ea26-4525-ab85-dd11e60815e3](/phenotypic-features/ab7e4cfe-ea26-4525-ab85-dd11e60815e3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [416ac19b-be8b-4230-b781-ac2ad4d72ca0](/phenotypic-features/416ac19b-be8b-4230-b781-ac2ad4d72ca0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [d5720da2-f518-4f62-ab22-531e43e00201](/phenotypic-features/d5720da2-f518-4f62-ab22-531e43e00201/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [101b5ed8-c92e-433b-a591-b7bef11037b5](/phenotypic-features/101b5ed8-c92e-433b-a591-b7bef11037b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [d5751e04-de2d-45d7-87a7-92a56d3bf07a](/phenotypic-features/d5751e04-de2d-45d7-87a7-92a56d3bf07a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [c6cfcb7d-d869-4c3a-a1ba-29a4ce9dd0c8](/phenotypic-features/c6cfcb7d-d869-4c3a-a1ba-29a4ce9dd0c8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [894b8828-e989-4019-811a-f7d4fde1ec70](/phenotypic-features/894b8828-e989-4019-811a-f7d4fde1ec70/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [08889386-b912-4c98-bab0-a34b9d17b94b](/phenotypic-features/08889386-b912-4c98-bab0-a34b9d17b94b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [c1a58f29-abf8-4622-8885-66a6a187bb34](/phenotypic-features/c1a58f29-abf8-4622-8885-66a6a187bb34/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [f09ab874-d34c-4112-a29b-df214539e6d3](/phenotypic-features/f09ab874-d34c-4112-a29b-df214539e6d3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [1f96aec6-913b-49bc-a91c-fefe6ee0f2c8](/phenotypic-features/1f96aec6-913b-49bc-a91c-fefe6ee0f2c8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [46ac3c05-d084-4544-9dc8-dde826feacca](/phenotypic-features/46ac3c05-d084-4544-9dc8-dde826feacca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [a7442a1b-b216-4558-b5ce-da87bc57ab97](/phenotypic-features/a7442a1b-b216-4558-b5ce-da87bc57ab97/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [d541e28f-08ad-4377-9c97-46a97fbcc210](/phenotypic-features/d541e28f-08ad-4377-9c97-46a97fbcc210/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [b50b2000-1aa4-4de2-9522-a17abbcf0cdf](/phenotypic-features/b50b2000-1aa4-4de2-9522-a17abbcf0cdf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [913486c6-1632-4162-988b-cd0caf90c409](/phenotypic-features/913486c6-1632-4162-988b-cd0caf90c409/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [52075c15-8fbc-43f4-8ea7-daca38913ca8](/phenotypic-features/52075c15-8fbc-43f4-8ea7-daca38913ca8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [3190b852-4196-43c9-9da6-03869014b3bb](/phenotypic-features/3190b852-4196-43c9-9da6-03869014b3bb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [05b2e6f0-0942-4a97-ba30-ab604675cecf](/phenotypic-features/05b2e6f0-0942-4a97-ba30-ab604675cecf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [9a07089a-e55f-4366-921e-fc24aeb5118a](/phenotypic-features/9a07089a-e55f-4366-921e-fc24aeb5118a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8891KXRJ](/human-donors/IGVFDO8891KXRJ/) has in progress subobject phenotypic feature [f2101a81-e55f-43bb-a630-eb88c8dc202b](/phenotypic-features/f2101a81-e55f-43bb-a630-eb88c8dc202b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8891KXRJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8891KXRJ](/human-donors/IGVFDO8891KXRJ/) has in progress subobject phenotypic feature [6490cb03-ac22-485a-aa91-ac5cc4ac399c](/phenotypic-features/6490cb03-ac22-485a-aa91-ac5cc4ac399c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8891KXRJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8891KXRJ](/human-donors/IGVFDO8891KXRJ/) has in progress subobject phenotypic feature [ba7722d9-75b0-4b99-ab90-566c5038d6dc](/phenotypic-features/ba7722d9-75b0-4b99-ab90-566c5038d6dc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8891KXRJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8891KXRJ](/human-donors/IGVFDO8891KXRJ/) has in progress subobject phenotypic feature [67d610ff-1188-474e-b062-65d1c3cd425e](/phenotypic-features/67d610ff-1188-474e-b062-65d1c3cd425e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8891KXRJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2207KFPL](/human-donors/IGVFDO2207KFPL/) has in progress subobject phenotypic feature [f94ea7b2-cd2e-48e0-852d-bc22ab3a9753](/phenotypic-features/f94ea7b2-cd2e-48e0-852d-bc22ab3a9753/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2207KFPL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2207KFPL](/human-donors/IGVFDO2207KFPL/) has in progress subobject phenotypic feature [25126354-ca02-4ec1-a06e-36b0db2021bc](/phenotypic-features/25126354-ca02-4ec1-a06e-36b0db2021bc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2207KFPL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2207KFPL](/human-donors/IGVFDO2207KFPL/) has in progress subobject phenotypic feature [00112659-1a18-4582-b793-18e4c99be394](/phenotypic-features/00112659-1a18-4582-b793-18e4c99be394/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2207KFPL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2207KFPL](/human-donors/IGVFDO2207KFPL/) has in progress subobject phenotypic feature [c14cc96a-accc-4eb0-b1cf-501d7392c9b1](/phenotypic-features/c14cc96a-accc-4eb0-b1cf-501d7392c9b1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2207KFPL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2207KFPL](/human-donors/IGVFDO2207KFPL/) has in progress subobject phenotypic feature [ad40ee00-f060-451c-abbf-813c660d92ca](/phenotypic-features/ad40ee00-f060-451c-abbf-813c660d92ca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2207KFPL/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS8707VRYD](/measurement-sets/IGVFDS8707VRYD/) has sequence file(s): [IGVFFI9162YUSU](/sequence-files/IGVFFI9162YUSU/), [IGVFFI6654XIQU](/sequence-files/IGVFFI6654XIQU/), [IGVFFI9523ELJM](/sequence-files/IGVFFI9523ELJM/), [IGVFFI5535LKNG](/sequence-files/IGVFFI5535LKNG/), [IGVFFI0981BHXC](/sequence-files/IGVFFI0981BHXC/), [IGVFFI0773QGYK](/sequence-files/IGVFFI0773QGYK/), [IGVFFI3139OZLF](/sequence-files/IGVFFI3139OZLF/), [IGVFFI7745DWJL](/sequence-files/IGVFFI7745DWJL/), [IGVFFI0248CLIV](/sequence-files/IGVFFI0248CLIV/), [IGVFFI6767NGDR](/sequence-files/IGVFFI6767NGDR/), [IGVFFI7376LFUP](/sequence-files/IGVFFI7376LFUP/), [IGVFFI9949WCJL](/sequence-files/IGVFFI9949WCJL/), [IGVFFI9389OSBH](/sequence-files/IGVFFI9389OSBH/), [IGVFFI8536MOWS](/sequence-files/IGVFFI8536MOWS/), [IGVFFI1538YGNJ](/sequence-files/IGVFFI1538YGNJ/), [IGVFFI9471JZCX](/sequence-files/IGVFFI9471JZCX/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS8707VRYD/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS8707VRYD](/measurement-sets/IGVFDS8707VRYD/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS8707VRYD/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS8707VRYD](/measurement-sets/IGVFDS8707VRYD/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS8707VRYD/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T21:37:24.155786+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO2045AFUW/",
"accession": "IGVFDO2045AFUW",
"aliases": [
"igvf:corces_donor_BANN1404"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0411QFOF/",
"accession": "IGVFDO0411QFOF",
"aliases": [
"igvf:corces_donor_BANN1750"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5205IAEO/",
"accession": "IGVFDO5205IAEO",
"aliases": [
"igvf:corces_donor_BANN1632"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6837RJUQ/",
"accession": "IGVFDO6837RJUQ",
"aliases": [
"igvf:corces_donor_BANN1201"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8817BLIU/",
"accession": "IGVFDO8817BLIU",
"aliases": [
"igvf:corces_donor_BANN1039"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8891KXRJ/",
"accession": "IGVFDO8891KXRJ",
"aliases": [
"igvf:corces_donor_BANN1737"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7606UOXI/",
"accession": "IGVFDO7606UOXI",
"aliases": [
"igvf:corces_donor_BANN1570"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7754VJKM/",
"accession": "IGVFDO7754VJKM",
"aliases": [
"igvf:corces_donor_BANN0341"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1797DNPW/",
"accession": "IGVFDO1797DNPW",
"aliases": [
"igvf:corces_donor_BANN1827"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2207KFPL/",
"accession": "IGVFDO2207KFPL",
"aliases": [
"igvf:corces_donor_BANN0413"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3795BUZW/",
"accession": "IGVFDO3795BUZW",
"aliases": [
"igvf:corces_donor_BANN1311"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9028PIDF/",
"accession": "IGVFDO9028PIDF",
"aliases": [
"igvf:corces_donor_BANN1637"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI9162YUSU/",
"accession": "IGVFFI9162YUSU",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:26:08.260862+00:00",
"file_format": "fastq",
"file_size": 1124926327,
"href": "/sequence-files/IGVFFI9162YUSU/@@download/IGVFFI9162YUSU.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/86bdaeb4-cf1c-43ee-a6a0-1acc85c27a35/IGVFFI9162YUSU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6654XIQU/",
"accession": "IGVFFI6654XIQU",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:26:11.899210+00:00",
"file_format": "fastq",
"file_size": 2418107088,
"href": "/sequence-files/IGVFFI6654XIQU/@@download/IGVFFI6654XIQU.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/491bbf58-7aaa-499c-9644-ea8264fe46e5/IGVFFI6654XIQU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L007_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9523ELJM/",
"accession": "IGVFFI9523ELJM",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L008_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:26:23.825787+00:00",
"file_format": "fastq",
"file_size": 2444809805,
"href": "/sequence-files/IGVFFI9523ELJM/@@download/IGVFFI9523ELJM.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/f5eebf86-99fa-43a2-9d28-bffaa2c0622a/IGVFFI9523ELJM.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L008_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5535LKNG/",
"accession": "IGVFFI5535LKNG",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L006_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:25:58.106424+00:00",
"file_format": "fastq",
"file_size": 2547366384,
"href": "/sequence-files/IGVFFI5535LKNG/@@download/IGVFFI5535LKNG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/3e5c7506-bcb1-4669-acad-a1191d34b72e/IGVFFI5535LKNG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L006_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0981BHXC/",
"accession": "IGVFFI0981BHXC",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L008_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:26:20.290668+00:00",
"file_format": "fastq",
"file_size": 1134100511,
"href": "/sequence-files/IGVFFI0981BHXC/@@download/IGVFFI0981BHXC.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/dab65566-6c04-4043-b40d-584b5c13d8b7/IGVFFI0981BHXC.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L008_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0773QGYK/",
"accession": "IGVFFI0773QGYK",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L005_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:25:48.027941+00:00",
"file_format": "fastq",
"file_size": 2552210315,
"href": "/sequence-files/IGVFFI0773QGYK/@@download/IGVFFI0773QGYK.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b9c4c27f-2ab0-4a2b-85a8-347bdd30d772/IGVFFI0773QGYK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L005_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3139OZLF/",
"accession": "IGVFFI3139OZLF",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L006_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:25:50.824248+00:00",
"file_format": "fastq",
"file_size": 347003577,
"href": "/sequence-files/IGVFFI3139OZLF/@@download/IGVFFI3139OZLF.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/d677c028-5c46-48d7-b7a2-bf886c32c3f9/IGVFFI3139OZLF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L006_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7745DWJL/",
"accession": "IGVFFI7745DWJL",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L006_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:25:53.126997+00:00",
"file_format": "fastq",
"file_size": 398269785,
"href": "/sequence-files/IGVFFI7745DWJL/@@download/IGVFFI7745DWJL.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/3b4ad91c-b28b-4390-b5f1-e8bfdfafabfc/IGVFFI7745DWJL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L006_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0248CLIV/",
"accession": "IGVFFI0248CLIV",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:26:01.687517+00:00",
"file_format": "fastq",
"file_size": 333032155,
"href": "/sequence-files/IGVFFI0248CLIV/@@download/IGVFFI0248CLIV.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/6e9e0a02-44ba-4b7a-b552-1aa8662fc34f/IGVFFI0248CLIV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L007_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6767NGDR/",
"accession": "IGVFFI6767NGDR",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L006_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:25:55.649483+00:00",
"file_format": "fastq",
"file_size": 1183739424,
"href": "/sequence-files/IGVFFI6767NGDR/@@download/IGVFFI6767NGDR.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/5293c5ee-93be-4cc5-99e6-b5acafea63b6/IGVFFI6767NGDR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L006_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7376LFUP/",
"accession": "IGVFFI7376LFUP",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L005_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:25:40.087614+00:00",
"file_format": "fastq",
"file_size": 349915660,
"href": "/sequence-files/IGVFFI7376LFUP/@@download/IGVFFI7376LFUP.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/6d5179cc-3e1f-489e-98ea-e789d604d9b6/IGVFFI7376LFUP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L005_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9949WCJL/",
"accession": "IGVFFI9949WCJL",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L008_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:26:14.409996+00:00",
"file_format": "fastq",
"file_size": 329778959,
"href": "/sequence-files/IGVFFI9949WCJL/@@download/IGVFFI9949WCJL.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/f7b41ccb-79aa-425b-b79b-4cfdd2583a5e/IGVFFI9949WCJL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L008_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9389OSBH/",
"accession": "IGVFFI9389OSBH",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L005_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:25:42.613290+00:00",
"file_format": "fastq",
"file_size": 398985883,
"href": "/sequence-files/IGVFFI9389OSBH/@@download/IGVFFI9389OSBH.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b7520a3b-57d2-4faf-b467-ec375ccafdb9/IGVFFI9389OSBH.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L005_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8536MOWS/",
"accession": "IGVFFI8536MOWS",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L005_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:25:45.388964+00:00",
"file_format": "fastq",
"file_size": 1187113914,
"href": "/sequence-files/IGVFFI8536MOWS/@@download/IGVFFI8536MOWS.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/bb84fd77-7f30-4216-a7bc-b1562ffc5ea2/IGVFFI8536MOWS.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L005_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1538YGNJ/",
"accession": "IGVFFI1538YGNJ",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L007_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:26:04.285194+00:00",
"file_format": "fastq",
"file_size": 383084541,
"href": "/sequence-files/IGVFFI1538YGNJ/@@download/IGVFFI1538YGNJ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b50e4bdf-c9cc-44d2-b397-829c573fa565/IGVFFI1538YGNJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L007_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9471JZCX/",
"accession": "IGVFFI9471JZCX",
"aliases": [
"igvf:corces_sequenceFile_RNA_X044_G2_P044_L008_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:26:17.291376+00:00",
"file_format": "fastq",
"file_size": 379209567,
"href": "/sequence-files/IGVFFI9471JZCX/@@download/IGVFFI9471JZCX.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/49f2dab7-2ab6-4a87-b7e1-dfb19f89e722/IGVFFI9471JZCX.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X044_G2_L002_P044_S36_L008_I2_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI8751YQRY/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS8318EODY/",
"accession": "IGVFDS8318EODY",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM6240XBPL/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM6240XBPL",
"aliases": [
"igvf:corces_multiplexedSample_X044_G2"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; Homo sapiens (male, 85 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T13:25:40.087614+00:00",
"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "dc9cbffb-49ad-47c3-a25e-77434ac91891"
}