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IGVFDS8700PWZJ

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)
Protocols
Aliases
bradley-bernstein:scATAC Lib 120
buenrostro-bernstein:scATAC Lib 120
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R2
262
Read 2, Barcode index
2.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
262
Read 1
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
252
Read 1
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
252
Read 2, Barcode index
2.0 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1503
  • buenrostro-bernstein:Donor 1503
female
Mus musculus

Related Multiome Datasets

5 items
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 128
  • buenrostro-bernstein:scRNA Lib 128
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 129
  • buenrostro-bernstein:scRNA Lib 129
Jason Buenrostro, Broad
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 118
  • buenrostro-bernstein:scATAC Lib 118
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 127
  • buenrostro-bernstein:scRNA Lib 127
Jason Buenrostro, Broad
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 119
  • buenrostro-bernstein:scATAC Lib 119
Jason Buenrostro, Broad