{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS8654DWFA/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS8654DWFA",
"aliases": [
"igvf:corces_measurementSet_X055_G4_RNA"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2031ESZX](/human-donors/IGVFDO2031ESZX/) has in progress subobject phenotypic feature [db023dab-98aa-456b-b675-32fe8cb67884](/phenotypic-features/db023dab-98aa-456b-b675-32fe8cb67884/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2031ESZX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2031ESZX](/human-donors/IGVFDO2031ESZX/) has in progress subobject phenotypic feature [5cce85b5-89b2-4c7b-8a69-d06bd4a563d9](/phenotypic-features/5cce85b5-89b2-4c7b-8a69-d06bd4a563d9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2031ESZX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2031ESZX](/human-donors/IGVFDO2031ESZX/) has in progress subobject phenotypic feature [e4956f7b-f7c0-4081-a17f-b98bace43aac](/phenotypic-features/e4956f7b-f7c0-4081-a17f-b98bace43aac/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2031ESZX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2031ESZX](/human-donors/IGVFDO2031ESZX/) has in progress subobject phenotypic feature [54f5a511-5d75-41cb-866a-6ee82ddb209b](/phenotypic-features/54f5a511-5d75-41cb-866a-6ee82ddb209b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2031ESZX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [29eaabd2-1a32-481b-a752-2735f7051661](/phenotypic-features/29eaabd2-1a32-481b-a752-2735f7051661/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1302YEPX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [957cdcbe-cef4-45fe-94f2-d2bb63ed5e05](/phenotypic-features/957cdcbe-cef4-45fe-94f2-d2bb63ed5e05/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1302YEPX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [f5b4fdb4-cb5d-403a-9c5c-6208c6a3624e](/phenotypic-features/f5b4fdb4-cb5d-403a-9c5c-6208c6a3624e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1302YEPX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [36d319d6-1788-48ea-a5f8-3153454ccab7](/phenotypic-features/36d319d6-1788-48ea-a5f8-3153454ccab7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1302YEPX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [83351a5f-d758-46ad-b40e-64f2557e39e8](/phenotypic-features/83351a5f-d758-46ad-b40e-64f2557e39e8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1302YEPX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [7d5fed93-7936-473e-8fa3-16d013205c27](/phenotypic-features/7d5fed93-7936-473e-8fa3-16d013205c27/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [9687710e-1657-496d-a39a-02a10f0c7fcb](/phenotypic-features/9687710e-1657-496d-a39a-02a10f0c7fcb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [d6465499-8253-4073-8c50-1cf8deb110dc](/phenotypic-features/d6465499-8253-4073-8c50-1cf8deb110dc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [076a6fa7-1eec-479d-baae-93da0b5812c4](/phenotypic-features/076a6fa7-1eec-479d-baae-93da0b5812c4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [e8ffe241-f099-4ec4-90fe-c8e355fd2ae5](/phenotypic-features/e8ffe241-f099-4ec4-90fe-c8e355fd2ae5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [9e1ef8ad-9ca2-471a-b9f8-861c43a2d643](/phenotypic-features/9e1ef8ad-9ca2-471a-b9f8-861c43a2d643/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [03671afd-a812-4641-acd8-ab7ca518f1a5](/phenotypic-features/03671afd-a812-4641-acd8-ab7ca518f1a5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [18771fd8-b1f4-4112-ac0d-363d231fec46](/phenotypic-features/18771fd8-b1f4-4112-ac0d-363d231fec46/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [f38ae152-a841-4578-80ad-e603838eb149](/phenotypic-features/f38ae152-a841-4578-80ad-e603838eb149/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [a44604d0-0960-4f7f-a9a4-8399f31bfe01](/phenotypic-features/a44604d0-0960-4f7f-a9a4-8399f31bfe01/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [b6e61b30-fc06-4574-bff5-d55b926cf9f3](/phenotypic-features/b6e61b30-fc06-4574-bff5-d55b926cf9f3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [07bba92c-e0e2-4492-9c8e-07b2afc7b700](/phenotypic-features/07bba92c-e0e2-4492-9c8e-07b2afc7b700/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [ab7e4cfe-ea26-4525-ab85-dd11e60815e3](/phenotypic-features/ab7e4cfe-ea26-4525-ab85-dd11e60815e3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [101b5ed8-c92e-433b-a591-b7bef11037b5](/phenotypic-features/101b5ed8-c92e-433b-a591-b7bef11037b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [416ac19b-be8b-4230-b781-ac2ad4d72ca0](/phenotypic-features/416ac19b-be8b-4230-b781-ac2ad4d72ca0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [d5720da2-f518-4f62-ab22-531e43e00201](/phenotypic-features/d5720da2-f518-4f62-ab22-531e43e00201/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [4ce05436-3aba-4ff2-adfe-7b35c9701431](/phenotypic-features/4ce05436-3aba-4ff2-adfe-7b35c9701431/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [20ce9114-8f44-47dc-b1ff-6a44688bf47a](/phenotypic-features/20ce9114-8f44-47dc-b1ff-6a44688bf47a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [cf42e423-497d-4ce1-b16c-de4b75c47c15](/phenotypic-features/cf42e423-497d-4ce1-b16c-de4b75c47c15/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [ea3dee25-4ac9-4957-a68d-c098ce615ca3](/phenotypic-features/ea3dee25-4ac9-4957-a68d-c098ce615ca3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [fcb965cc-7b61-4d20-822d-bd5a898093b5](/phenotypic-features/fcb965cc-7b61-4d20-822d-bd5a898093b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [633cb08c-78bd-4268-b5d8-b893a02d26f8](/phenotypic-features/633cb08c-78bd-4268-b5d8-b893a02d26f8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [5d86271f-e200-458e-b626-d45775c1f778](/phenotypic-features/5d86271f-e200-458e-b626-d45775c1f778/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [0165d0f4-b610-4164-9bc3-08dc74af02b3](/phenotypic-features/0165d0f4-b610-4164-9bc3-08dc74af02b3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [3a8f2048-d423-49dc-872f-a2d52489895c](/phenotypic-features/3a8f2048-d423-49dc-872f-a2d52489895c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [f57b6265-94b7-4979-be4c-73ef23b5faba](/phenotypic-features/f57b6265-94b7-4979-be4c-73ef23b5faba/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [87d488ba-ef89-494c-8024-bee2b8535732](/phenotypic-features/87d488ba-ef89-494c-8024-bee2b8535732/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [b26dcc82-a5c2-42f3-a63e-a43fd9359ebf](/phenotypic-features/b26dcc82-a5c2-42f3-a63e-a43fd9359ebf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [27767bd2-d2f7-4c12-a080-0891f07591b7](/phenotypic-features/27767bd2-d2f7-4c12-a080-0891f07591b7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [213d8bcb-11ce-4b7f-ae80-8a3e9b73ae83](/phenotypic-features/213d8bcb-11ce-4b7f-ae80-8a3e9b73ae83/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [5c5d17b8-c589-44ff-8c25-ac4b8b32e0fc](/phenotypic-features/5c5d17b8-c589-44ff-8c25-ac4b8b32e0fc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [3e3c67a3-add2-494d-a64d-c47dd7d5c897](/phenotypic-features/3e3c67a3-add2-494d-a64d-c47dd7d5c897/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [78a7c349-10a5-4b5a-9661-21b6831612a7](/phenotypic-features/78a7c349-10a5-4b5a-9661-21b6831612a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [b680dc57-e349-4ea9-8cb8-5c5426aaad31](/phenotypic-features/b680dc57-e349-4ea9-8cb8-5c5426aaad31/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [a8a7eb19-35fc-4266-87cf-32ecd8e25f0b](/phenotypic-features/a8a7eb19-35fc-4266-87cf-32ecd8e25f0b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [a04cdee4-28e8-4690-acb4-48bab45f7927](/phenotypic-features/a04cdee4-28e8-4690-acb4-48bab45f7927/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8584FBOT](/human-donors/IGVFDO8584FBOT/) has in progress subobject phenotypic feature [78c7f600-8577-4123-ae02-de8701e442e7](/phenotypic-features/78c7f600-8577-4123-ae02-de8701e442e7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8584FBOT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8584FBOT](/human-donors/IGVFDO8584FBOT/) has in progress subobject phenotypic feature [b15b14de-7a08-4678-af44-1c5811e19bf3](/phenotypic-features/b15b14de-7a08-4678-af44-1c5811e19bf3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8584FBOT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8584FBOT](/human-donors/IGVFDO8584FBOT/) has in progress subobject phenotypic feature [e3d1ac8a-eeaa-4332-9dc9-bba7e61cdd99](/phenotypic-features/e3d1ac8a-eeaa-4332-9dc9-bba7e61cdd99/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8584FBOT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8584FBOT](/human-donors/IGVFDO8584FBOT/) has in progress subobject phenotypic feature [081bee5b-d6e8-4ef1-81cf-9b3d251602f3](/phenotypic-features/081bee5b-d6e8-4ef1-81cf-9b3d251602f3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8584FBOT/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS8654DWFA](/measurement-sets/IGVFDS8654DWFA/) has sequence file(s): [IGVFFI6378OPFN](/sequence-files/IGVFFI6378OPFN/), [IGVFFI5292WQSJ](/sequence-files/IGVFFI5292WQSJ/), [IGVFFI1955WUUM](/sequence-files/IGVFFI1955WUUM/), [IGVFFI7697VYIA](/sequence-files/IGVFFI7697VYIA/), [IGVFFI2149YPCL](/sequence-files/IGVFFI2149YPCL/), [IGVFFI7999AWXY](/sequence-files/IGVFFI7999AWXY/), [IGVFFI6340SMAE](/sequence-files/IGVFFI6340SMAE/), [IGVFFI1224KZXQ](/sequence-files/IGVFFI1224KZXQ/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS8654DWFA/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS8654DWFA](/measurement-sets/IGVFDS8654DWFA/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS8654DWFA/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS8654DWFA](/measurement-sets/IGVFDS8654DWFA/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS8654DWFA/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T21:39:32.758143+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO5214IKNF/",
"accession": "IGVFDO5214IKNF",
"aliases": [
"igvf:corces_donor_BANN1070"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2028IGVN/",
"accession": "IGVFDO2028IGVN",
"aliases": [
"igvf:corces_donor_BANN1256"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7051PRHR/",
"accession": "IGVFDO7051PRHR",
"aliases": [
"igvf:corces_donor_BANN1234"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0802OVOD/",
"accession": "IGVFDO0802OVOD",
"aliases": [
"igvf:corces_donor_BANN1030"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9028PIDF/",
"accession": "IGVFDO9028PIDF",
"aliases": [
"igvf:corces_donor_BANN1637"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2031ESZX/",
"accession": "IGVFDO2031ESZX",
"aliases": [
"igvf:corces_donor_BANN1037"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5205IAEO/",
"accession": "IGVFDO5205IAEO",
"aliases": [
"igvf:corces_donor_BANN1632"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4273OHGB/",
"accession": "IGVFDO4273OHGB",
"aliases": [
"igvf:corces_donor_BANN0322"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8584FBOT/",
"accession": "IGVFDO8584FBOT",
"aliases": [
"igvf:corces_donor_BANN0315"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1302YEPX/",
"accession": "IGVFDO1302YEPX",
"aliases": [
"igvf:corces_donor_BANN0215"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI6378OPFN/",
"accession": "IGVFFI6378OPFN",
"aliases": [
"igvf:corces_sequenceFile_RNA_X055_G4_P074_L004_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:42:18.295722+00:00",
"file_format": "fastq",
"file_size": 1187568353,
"href": "/sequence-files/IGVFFI6378OPFN/@@download/IGVFFI6378OPFN.fastq.gz",
"md5sum": "606d68103db994671fc472eb602e3bc8",
"s3_uri": "s3://igvf-files/2025/03/20/95c33f60-4725-44c0-959b-6f367e605a43/IGVFFI6378OPFN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X055_G4_L004_P074_S24_L004_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5292WQSJ/",
"accession": "IGVFFI5292WQSJ",
"aliases": [
"igvf:corces_sequenceFile_RNA_X055_G4_P074_L003_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:42:16.104765+00:00",
"file_format": "fastq",
"file_size": 11215155578,
"href": "/sequence-files/IGVFFI5292WQSJ/@@download/IGVFFI5292WQSJ.fastq.gz",
"md5sum": "842ebe869e87f52ec774fb27fb4edd64",
"s3_uri": "s3://igvf-files/2025/03/20/e6fc585a-66da-4416-a3ed-92bdb7f24346/IGVFFI5292WQSJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X055_G4_L004_P074_S24_L003_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1955WUUM/",
"accession": "IGVFFI1955WUUM",
"aliases": [
"igvf:corces_sequenceFile_RNA_X055_G4_P074_L003_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:42:13.679365+00:00",
"file_format": "fastq",
"file_size": 14207108116,
"href": "/sequence-files/IGVFFI1955WUUM/@@download/IGVFFI1955WUUM.fastq.gz",
"md5sum": "3228adbbc61e9bd8d3f47337d5271d13",
"s3_uri": "s3://igvf-files/2025/03/20/61edcdfa-4b5a-4aeb-b45a-a9ed95374e4c/IGVFFI1955WUUM.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X055_G4_L004_P074_S24_L003_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7697VYIA/",
"accession": "IGVFFI7697VYIA",
"aliases": [
"igvf:corces_sequenceFile_RNA_X055_G4_P074_L004_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:42:20.372418+00:00",
"file_format": "fastq",
"file_size": 1121227374,
"href": "/sequence-files/IGVFFI7697VYIA/@@download/IGVFFI7697VYIA.fastq.gz",
"md5sum": "190a386e30eb5f1c1c21ef26e7e87ff7",
"s3_uri": "s3://igvf-files/2025/03/20/aaeba9b2-d37f-4109-ad43-a8d70acf7f59/IGVFFI7697VYIA.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X055_G4_L004_P074_S24_L004_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2149YPCL/",
"accession": "IGVFFI2149YPCL",
"aliases": [
"igvf:corces_sequenceFile_RNA_X055_G4_P074_L003_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:42:08.914300+00:00",
"file_format": "fastq",
"file_size": 1212735942,
"href": "/sequence-files/IGVFFI2149YPCL/@@download/IGVFFI2149YPCL.fastq.gz",
"md5sum": "e56d162735a1c1d64d7674458e5b04e4",
"s3_uri": "s3://igvf-files/2025/03/20/c3e5651c-e7d6-4311-92e7-24cf77a3ec60/IGVFFI2149YPCL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X055_G4_L004_P074_S24_L003_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7999AWXY/",
"accession": "IGVFFI7999AWXY",
"aliases": [
"igvf:corces_sequenceFile_RNA_X055_G4_P074_L004_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:42:22.994086+00:00",
"file_format": "fastq",
"file_size": 13756405533,
"href": "/sequence-files/IGVFFI7999AWXY/@@download/IGVFFI7999AWXY.fastq.gz",
"md5sum": "b615162f2b4916d94d9adf274cc18055",
"s3_uri": "s3://igvf-files/2025/03/20/da81eace-4060-493d-af16-7f3e383a19b1/IGVFFI7999AWXY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X055_G4_L004_P074_S24_L004_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6340SMAE/",
"accession": "IGVFFI6340SMAE",
"aliases": [
"igvf:corces_sequenceFile_RNA_X055_G4_P074_L004_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:42:25.306236+00:00",
"file_format": "fastq",
"file_size": 11051462915,
"href": "/sequence-files/IGVFFI6340SMAE/@@download/IGVFFI6340SMAE.fastq.gz",
"md5sum": "59dd5e34965a0a581e327449a7c6a4bf",
"s3_uri": "s3://igvf-files/2025/03/20/9f0e9ab8-8149-41b9-8814-7f7703ca4bb0/IGVFFI6340SMAE.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X055_G4_L004_P074_S24_L004_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1224KZXQ/",
"accession": "IGVFFI1224KZXQ",
"aliases": [
"igvf:corces_sequenceFile_RNA_X055_G4_P074_L003_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:42:11.306091+00:00",
"file_format": "fastq",
"file_size": 1146098889,
"href": "/sequence-files/IGVFFI1224KZXQ/@@download/IGVFFI1224KZXQ.fastq.gz",
"md5sum": "b5fe176a5866388aa60926ff1f9befe8",
"s3_uri": "s3://igvf-files/2025/03/20/2b609cfa-f5e4-4a6f-869c-9990ca280ec4/IGVFFI1224KZXQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X055_G4_L004_P074_S24_L003_I2_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI8751YQRY/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS0860RBBW/",
"accession": "IGVFDS0860RBBW",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM1455UODN/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM1455UODN",
"aliases": [
"igvf:corces_multiplexedSample_X055_G4"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 74 years) cerebellar cortex tissue; ... and 8 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T23:42:08.914300+00:00",
"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "56f62459-51e0-4ee1-805d-84c72ee8814a"
}