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IGVFDS8539IUFA

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 200)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 556
Submitter Comment
Does not have corresponding scRNA seq MeasurementSet due to failed QC
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
I1
814
Barcode index
22773CLT3
723 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
832
Barcode index
22773CLT3
723 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
832
Read 1
22773CLT3
1.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
814
Read 1
22773CLT3
1.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
832
Read 2
22773CLT3
809 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
814
Read 2
22773CLT3
806 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 200)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens