{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS8528XJMX/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS8528XJMX",
"aliases": [
"igvf:corces_measurementSet_RP018_G1_ATAC"
],
"assay_term": {
"@id": "/assay-terms/OBI_0002762/",
"assay_slims": [
"chromatin accessibility"
],
"status": "released",
"term_name": "single-nucleus ATAC-seq"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [201dcd5e-a9ec-49ae-88a5-7f5f59f4d6dc](/phenotypic-features/201dcd5e-a9ec-49ae-88a5-7f5f59f4d6dc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [6996673c-1993-4682-87ae-6d3968ab4eba](/phenotypic-features/6996673c-1993-4682-87ae-6d3968ab4eba/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [7007fd27-1b94-42fb-a2cb-5a579dcbbfc2](/phenotypic-features/7007fd27-1b94-42fb-a2cb-5a579dcbbfc2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [2770d2df-cfa4-4078-9bd1-51ee1d3c62b4](/phenotypic-features/2770d2df-cfa4-4078-9bd1-51ee1d3c62b4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [de15fdf8-d7dc-4a9e-9fcd-d5bc83119b19](/phenotypic-features/de15fdf8-d7dc-4a9e-9fcd-d5bc83119b19/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3911JQLE](/human-donors/IGVFDO3911JQLE/) has in progress subobject phenotypic feature [33c7729b-5ddf-4b58-bd09-9717dac5eb61](/phenotypic-features/33c7729b-5ddf-4b58-bd09-9717dac5eb61/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3911JQLE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [626d75db-88c2-45dc-b60e-0ba3d743554a](/phenotypic-features/626d75db-88c2-45dc-b60e-0ba3d743554a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [7215e4eb-09b8-45c2-9152-ab968f0bea53](/phenotypic-features/7215e4eb-09b8-45c2-9152-ab968f0bea53/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [b97cca29-dfd6-4e48-83dc-143032916f09](/phenotypic-features/b97cca29-dfd6-4e48-83dc-143032916f09/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [934388ae-cdc7-44f0-8047-e19d5c9bc009](/phenotypic-features/934388ae-cdc7-44f0-8047-e19d5c9bc009/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [95318355-70c3-4d1f-b769-23c8f6fcb818](/phenotypic-features/95318355-70c3-4d1f-b769-23c8f6fcb818/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6335EDSP](/human-donors/IGVFDO6335EDSP/) has in progress subobject phenotypic feature [1356878d-9f70-4902-a5b3-1606e717cd56](/phenotypic-features/1356878d-9f70-4902-a5b3-1606e717cd56/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6335EDSP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4812DEVH](/human-donors/IGVFDO4812DEVH/) has in progress subobject phenotypic feature [15680b15-8bc5-4428-997e-c9111c8b41ac](/phenotypic-features/15680b15-8bc5-4428-997e-c9111c8b41ac/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4812DEVH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4812DEVH](/human-donors/IGVFDO4812DEVH/) has in progress subobject phenotypic feature [e1f4ef66-e5ec-4de4-ae91-334b64b9bc6c](/phenotypic-features/e1f4ef66-e5ec-4de4-ae91-334b64b9bc6c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4812DEVH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4812DEVH](/human-donors/IGVFDO4812DEVH/) has in progress subobject phenotypic feature [ad1bcdfd-6e43-47ee-8477-26145b08b0c9](/phenotypic-features/ad1bcdfd-6e43-47ee-8477-26145b08b0c9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4812DEVH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4812DEVH](/human-donors/IGVFDO4812DEVH/) has in progress subobject phenotypic feature [96469e31-9271-4309-9f9f-d7eefb2cb92b](/phenotypic-features/96469e31-9271-4309-9f9f-d7eefb2cb92b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4812DEVH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4812DEVH](/human-donors/IGVFDO4812DEVH/) has in progress subobject phenotypic feature [46b9a3de-e971-44a2-8e56-eb79f50ae73d](/phenotypic-features/46b9a3de-e971-44a2-8e56-eb79f50ae73d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4812DEVH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4812DEVH](/human-donors/IGVFDO4812DEVH/) has in progress subobject phenotypic feature [b3ccb109-8a8e-437c-a873-93aac4c48898](/phenotypic-features/b3ccb109-8a8e-437c-a873-93aac4c48898/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4812DEVH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [30873f1f-93e3-45fa-b813-7a7c9c420ed2](/phenotypic-features/30873f1f-93e3-45fa-b813-7a7c9c420ed2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [eb1dccc8-a9b4-40ca-9e10-bf67678c6cc5](/phenotypic-features/eb1dccc8-a9b4-40ca-9e10-bf67678c6cc5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [39593b92-86ab-4512-ae6a-c5a8c8473cf4](/phenotypic-features/39593b92-86ab-4512-ae6a-c5a8c8473cf4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [933de8aa-498d-45bb-9b95-cf15aa70af80](/phenotypic-features/933de8aa-498d-45bb-9b95-cf15aa70af80/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [89a557dc-535c-4a80-b083-6a6fd0ab31e8](/phenotypic-features/89a557dc-535c-4a80-b083-6a6fd0ab31e8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [ee30cf86-da5d-443e-a7f7-9fcad693a6f5](/phenotypic-features/ee30cf86-da5d-443e-a7f7-9fcad693a6f5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8a8a3203-c182-4206-8786-d22c604017ca](/phenotypic-features/8a8a3203-c182-4206-8786-d22c604017ca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [5aff39eb-64aa-4ab2-b6ac-9352e4e5974d](/phenotypic-features/5aff39eb-64aa-4ab2-b6ac-9352e4e5974d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [e5d45886-2d5a-4f54-9595-ddecf9ee0dc3](/phenotypic-features/e5d45886-2d5a-4f54-9595-ddecf9ee0dc3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [a331f60c-ad57-4e67-abef-71ce7f5c533b](/phenotypic-features/a331f60c-ad57-4e67-abef-71ce7f5c533b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8d33ce55-7875-4008-8ea0-117b359f3bde](/phenotypic-features/8d33ce55-7875-4008-8ea0-117b359f3bde/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [362f11d9-5071-4bde-9bd2-a81f54c82b95](/phenotypic-features/362f11d9-5071-4bde-9bd2-a81f54c82b95/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [9a45b193-acc3-4a31-82a8-09bbb5deb7b8](/phenotypic-features/9a45b193-acc3-4a31-82a8-09bbb5deb7b8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [905212f3-9a73-48f8-9d8a-bbf1a29e09c2](/phenotypic-features/905212f3-9a73-48f8-9d8a-bbf1a29e09c2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [51003264-5fb0-442f-9309-d022709f2370](/phenotypic-features/51003264-5fb0-442f-9309-d022709f2370/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [72188cbf-1712-43d0-b0e0-1cc8c4d7b8c7](/phenotypic-features/72188cbf-1712-43d0-b0e0-1cc8c4d7b8c7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [0658a11f-70fb-4d39-9234-464658f0788c](/phenotypic-features/0658a11f-70fb-4d39-9234-464658f0788c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [a7442a1b-b216-4558-b5ce-da87bc57ab97](/phenotypic-features/a7442a1b-b216-4558-b5ce-da87bc57ab97/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [d541e28f-08ad-4377-9c97-46a97fbcc210](/phenotypic-features/d541e28f-08ad-4377-9c97-46a97fbcc210/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [46ac3c05-d084-4544-9dc8-dde826feacca](/phenotypic-features/46ac3c05-d084-4544-9dc8-dde826feacca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [913486c6-1632-4162-988b-cd0caf90c409](/phenotypic-features/913486c6-1632-4162-988b-cd0caf90c409/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [b50b2000-1aa4-4de2-9522-a17abbcf0cdf](/phenotypic-features/b50b2000-1aa4-4de2-9522-a17abbcf0cdf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [1f96aec6-913b-49bc-a91c-fefe6ee0f2c8](/phenotypic-features/1f96aec6-913b-49bc-a91c-fefe6ee0f2c8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [9a07089a-e55f-4366-921e-fc24aeb5118a](/phenotypic-features/9a07089a-e55f-4366-921e-fc24aeb5118a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [05b2e6f0-0942-4a97-ba30-ab604675cecf](/phenotypic-features/05b2e6f0-0942-4a97-ba30-ab604675cecf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [52075c15-8fbc-43f4-8ea7-daca38913ca8](/phenotypic-features/52075c15-8fbc-43f4-8ea7-daca38913ca8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [3190b852-4196-43c9-9da6-03869014b3bb](/phenotypic-features/3190b852-4196-43c9-9da6-03869014b3bb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7095OCLJ](/human-donors/IGVFDO7095OCLJ/) has in progress subobject phenotypic feature [ac242806-2b11-40d0-9628-6e319c7d67b6](/phenotypic-features/ac242806-2b11-40d0-9628-6e319c7d67b6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7095OCLJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7095OCLJ](/human-donors/IGVFDO7095OCLJ/) has in progress subobject phenotypic feature [9f57f492-c482-4a53-8922-5ec40bf8777f](/phenotypic-features/9f57f492-c482-4a53-8922-5ec40bf8777f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7095OCLJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7095OCLJ](/human-donors/IGVFDO7095OCLJ/) has in progress subobject phenotypic feature [8363461a-620b-4625-8cd0-fe83928b21f7](/phenotypic-features/8363461a-620b-4625-8cd0-fe83928b21f7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7095OCLJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7095OCLJ](/human-donors/IGVFDO7095OCLJ/) has in progress subobject phenotypic feature [e479b054-101b-4494-9188-68e22dbfb4a7](/phenotypic-features/e479b054-101b-4494-9188-68e22dbfb4a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7095OCLJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7095OCLJ](/human-donors/IGVFDO7095OCLJ/) has in progress subobject phenotypic feature [44805391-bb84-4aee-b329-cffefc4119ce](/phenotypic-features/44805391-bb84-4aee-b329-cffefc4119ce/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7095OCLJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [914b3b0b-909c-4dc4-843a-e573cd4fd215](/phenotypic-features/914b3b0b-909c-4dc4-843a-e573cd4fd215/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [2c7d3588-70c3-4cdf-909f-6063b09b76c4](/phenotypic-features/2c7d3588-70c3-4cdf-909f-6063b09b76c4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [2aa59ffb-56f1-4cc1-9e70-14558ac277ce](/phenotypic-features/2aa59ffb-56f1-4cc1-9e70-14558ac277ce/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [d6fded43-9df2-47be-ba89-6eddc5735c58](/phenotypic-features/d6fded43-9df2-47be-ba89-6eddc5735c58/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [31468a8a-f7b3-450e-8ba0-1d38345e86fa](/phenotypic-features/31468a8a-f7b3-450e-8ba0-1d38345e86fa/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [fdce3d00-2799-422c-afc2-6258a113b2fa](/phenotypic-features/fdce3d00-2799-422c-afc2-6258a113b2fa/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [08889386-b912-4c98-bab0-a34b9d17b94b](/phenotypic-features/08889386-b912-4c98-bab0-a34b9d17b94b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [f09ab874-d34c-4112-a29b-df214539e6d3](/phenotypic-features/f09ab874-d34c-4112-a29b-df214539e6d3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [c1a58f29-abf8-4622-8885-66a6a187bb34](/phenotypic-features/c1a58f29-abf8-4622-8885-66a6a187bb34/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [d5751e04-de2d-45d7-87a7-92a56d3bf07a](/phenotypic-features/d5751e04-de2d-45d7-87a7-92a56d3bf07a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [c6cfcb7d-d869-4c3a-a1ba-29a4ce9dd0c8](/phenotypic-features/c6cfcb7d-d869-4c3a-a1ba-29a4ce9dd0c8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2045AFUW](/human-donors/IGVFDO2045AFUW/) has in progress subobject phenotypic feature [894b8828-e989-4019-811a-f7d4fde1ec70](/phenotypic-features/894b8828-e989-4019-811a-f7d4fde1ec70/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2045AFUW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3500WGWY](/human-donors/IGVFDO3500WGWY/) has in progress subobject phenotypic feature [f0051b34-124d-4a7e-923a-0744c22167fc](/phenotypic-features/f0051b34-124d-4a7e-923a-0744c22167fc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3500WGWY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3500WGWY](/human-donors/IGVFDO3500WGWY/) has in progress subobject phenotypic feature [043ae635-9a60-4cc7-a6c8-16645a562cfe](/phenotypic-features/043ae635-9a60-4cc7-a6c8-16645a562cfe/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3500WGWY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3500WGWY](/human-donors/IGVFDO3500WGWY/) has in progress subobject phenotypic feature [fab5e871-48a1-4b36-a19c-b1db770b29bc](/phenotypic-features/fab5e871-48a1-4b36-a19c-b1db770b29bc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3500WGWY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3500WGWY](/human-donors/IGVFDO3500WGWY/) has in progress subobject phenotypic feature [35e99959-8112-4f03-bb25-0ca75a12586e](/phenotypic-features/35e99959-8112-4f03-bb25-0ca75a12586e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3500WGWY/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS8528XJMX](/measurement-sets/IGVFDS8528XJMX/) has sequence file(s): [IGVFFI7858GOBD](/sequence-files/IGVFFI7858GOBD/), [IGVFFI5717DRYO](/sequence-files/IGVFFI5717DRYO/), [IGVFFI7473SUQR](/sequence-files/IGVFFI7473SUQR/), [IGVFFI5765MSOQ](/sequence-files/IGVFFI5765MSOQ/), [IGVFFI2703AIWA](/sequence-files/IGVFFI2703AIWA/), [IGVFFI9742FPUP](/sequence-files/IGVFFI9742FPUP/), [IGVFFI3896BRTS](/sequence-files/IGVFFI3896BRTS/), [IGVFFI0211MYAY](/sequence-files/IGVFFI0211MYAY/), [IGVFFI0212EIPB](/sequence-files/IGVFFI0212EIPB/), [IGVFFI3423WNHT](/sequence-files/IGVFFI3423WNHT/), [IGVFFI2231NKBN](/sequence-files/IGVFFI2231NKBN/), [IGVFFI2510KQRY](/sequence-files/IGVFFI2510KQRY/), [IGVFFI8742MIAK](/sequence-files/IGVFFI8742MIAK/), [IGVFFI3680ZZNT](/sequence-files/IGVFFI3680ZZNT/), [IGVFFI6968ITML](/sequence-files/IGVFFI6968ITML/), [IGVFFI6049ZCXB](/sequence-files/IGVFFI6049ZCXB/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS8528XJMX/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS8528XJMX](/measurement-sets/IGVFDS8528XJMX/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS8528XJMX/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS8528XJMX](/measurement-sets/IGVFDS8528XJMX/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS8528XJMX/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T19:55:21.539981+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO3795BUZW/",
"accession": "IGVFDO3795BUZW",
"aliases": [
"igvf:corces_donor_BANN1311"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8046LKFZ/",
"accession": "IGVFDO8046LKFZ",
"aliases": [
"igvf:corces_donor_BANN1242"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7095OCLJ/",
"accession": "IGVFDO7095OCLJ",
"aliases": [
"igvf:corces_donor_BANN9917"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8504RBEL/",
"accession": "IGVFDO8504RBEL",
"aliases": [
"igvf:corces_donor_BANN1546"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2045AFUW/",
"accession": "IGVFDO2045AFUW",
"aliases": [
"igvf:corces_donor_BANN1404"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3500WGWY/",
"accession": "IGVFDO3500WGWY",
"aliases": [
"igvf:corces_donor_BANN1083"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3911JQLE/",
"accession": "IGVFDO3911JQLE",
"aliases": [
"igvf:corces_donor_BANN1412"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1797DNPW/",
"accession": "IGVFDO1797DNPW",
"aliases": [
"igvf:corces_donor_BANN1827"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6000JDZW/",
"accession": "IGVFDO6000JDZW",
"aliases": [
"igvf:corces_donor_BANN1858"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6335EDSP/",
"accession": "IGVFDO6335EDSP",
"aliases": [
"igvf:corces_donor_BANN1329"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7678VYKP/",
"accession": "IGVFDO7678VYKP",
"aliases": [
"igvf:corces_donor_BANN1235"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4812DEVH/",
"accession": "IGVFDO4812DEVH",
"aliases": [
"igvf:corces_donor_BANN1833"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI7858GOBD/",
"accession": "IGVFFI7858GOBD",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L006_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:42.449720+00:00",
"file_format": "fastq",
"file_size": 1959207593,
"href": "/sequence-files/IGVFFI7858GOBD/@@download/IGVFFI7858GOBD.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/04f2bd61-b417-402f-af3e-5a415a9e6df6/IGVFFI7858GOBD.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L006_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5717DRYO/",
"accession": "IGVFFI5717DRYO",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L005_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:33.881274+00:00",
"file_format": "fastq",
"file_size": 1089124428,
"href": "/sequence-files/IGVFFI5717DRYO/@@download/IGVFFI5717DRYO.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/151a70a7-efe9-46c2-ba0a-37cdb9ff23e2/IGVFFI5717DRYO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L005_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7473SUQR/",
"accession": "IGVFFI7473SUQR",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L005_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:36.967326+00:00",
"file_format": "fastq",
"file_size": 1923275800,
"href": "/sequence-files/IGVFFI7473SUQR/@@download/IGVFFI7473SUQR.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/6b6eadf4-b4c3-4a19-b7aa-3c60de5f2d2a/IGVFFI7473SUQR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L005_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5765MSOQ/",
"accession": "IGVFFI5765MSOQ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L006_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:47.897852+00:00",
"file_format": "fastq",
"file_size": 1939032484,
"href": "/sequence-files/IGVFFI5765MSOQ/@@download/IGVFFI5765MSOQ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/cf02cf82-34b0-4c5d-9d19-61b692d0831c/IGVFFI5765MSOQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L006_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2703AIWA/",
"accession": "IGVFFI2703AIWA",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:53.809683+00:00",
"file_format": "fastq",
"file_size": 1993219154,
"href": "/sequence-files/IGVFFI2703AIWA/@@download/IGVFFI2703AIWA.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/3bfc0cea-665c-42ea-9dfb-80418eef8268/IGVFFI2703AIWA.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9742FPUP/",
"accession": "IGVFFI9742FPUP",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L008_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:52:03.135719+00:00",
"file_format": "fastq",
"file_size": 472212034,
"href": "/sequence-files/IGVFFI9742FPUP/@@download/IGVFFI9742FPUP.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/ae114bf7-d830-4244-9b78-cfb3224c09c6/IGVFFI9742FPUP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L008_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3896BRTS/",
"accession": "IGVFFI3896BRTS",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:56.826845+00:00",
"file_format": "fastq",
"file_size": 1122109858,
"href": "/sequence-files/IGVFFI3896BRTS/@@download/IGVFFI3896BRTS.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/0e03baaa-b589-49a0-9799-e819a69ea197/IGVFFI3896BRTS.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L007_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0211MYAY/",
"accession": "IGVFFI0211MYAY",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L007_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:59.636668+00:00",
"file_format": "fastq",
"file_size": 1977722802,
"href": "/sequence-files/IGVFFI0211MYAY/@@download/IGVFFI0211MYAY.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/f4b8b55f-94a2-4174-84a1-8d5009db6730/IGVFFI0211MYAY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L007_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0212EIPB/",
"accession": "IGVFFI0212EIPB",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L006_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:39.613693+00:00",
"file_format": "fastq",
"file_size": 467280609,
"href": "/sequence-files/IGVFFI0212EIPB/@@download/IGVFFI0212EIPB.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/cdd33b8a-5ee8-4b41-a612-70cb419482f0/IGVFFI0212EIPB.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L006_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3423WNHT/",
"accession": "IGVFFI3423WNHT",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L005_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:27.126035+00:00",
"file_format": "fastq",
"file_size": 465531427,
"href": "/sequence-files/IGVFFI3423WNHT/@@download/IGVFFI3423WNHT.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/d8537a8c-db1e-47eb-bda6-ac1425004dbd/IGVFFI3423WNHT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L005_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2231NKBN/",
"accession": "IGVFFI2231NKBN",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L005_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:29.843702+00:00",
"file_format": "fastq",
"file_size": 1946593712,
"href": "/sequence-files/IGVFFI2231NKBN/@@download/IGVFFI2231NKBN.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/72fb1189-abdb-4c3e-a583-69a90aa76b03/IGVFFI2231NKBN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L005_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2510KQRY/",
"accession": "IGVFFI2510KQRY",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L008_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:52:12.621501+00:00",
"file_format": "fastq",
"file_size": 1989813280,
"href": "/sequence-files/IGVFFI2510KQRY/@@download/IGVFFI2510KQRY.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/5138f632-7c8b-4a1c-bbe9-3ea59993e621/IGVFFI2510KQRY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L008_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8742MIAK/",
"accession": "IGVFFI8742MIAK",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L006_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:44.936777+00:00",
"file_format": "fastq",
"file_size": 1098484486,
"href": "/sequence-files/IGVFFI8742MIAK/@@download/IGVFFI8742MIAK.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/ed7228bb-98bd-46e7-be1c-f083785dd249/IGVFFI8742MIAK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L006_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3680ZZNT/",
"accession": "IGVFFI3680ZZNT",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:51:50.316050+00:00",
"file_format": "fastq",
"file_size": 472797943,
"href": "/sequence-files/IGVFFI3680ZZNT/@@download/IGVFFI3680ZZNT.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/4d82ebf8-9e3a-412e-95c7-0b617c284eaf/IGVFFI3680ZZNT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L007_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6968ITML/",
"accession": "IGVFFI6968ITML",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L008_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:52:05.776750+00:00",
"file_format": "fastq",
"file_size": 2000271150,
"href": "/sequence-files/IGVFFI6968ITML/@@download/IGVFFI6968ITML.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/d1d71967-f8d1-4624-859e-1e0521446f6c/IGVFFI6968ITML.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L008_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6049ZCXB/",
"accession": "IGVFFI6049ZCXB",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP018_G1_P063_L008_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T20:52:08.932590+00:00",
"file_format": "fastq",
"file_size": 1126784024,
"href": "/sequence-files/IGVFFI6049ZCXB/@@download/IGVFFI6049ZCXB.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/e32402b3-ab63-4cb6-a01f-1351d2ba8296/IGVFFI6049ZCXB.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP018_G1_L001_P063_S29_L008_R2_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI7587TJLC/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS8319TUBW/",
"accession": "IGVFDS8319TUBW",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM3143GHVU/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM3143GHVU",
"aliases": [
"igvf:corces_multiplexedSample_RP018_G1"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T20:51:27.126035+00:00",
"summary": "single-nucleus ATAC-seq (10x multiome)",
"uuid": "188d0b35-861c-45ed-87ea-a6980cf97687"
}