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IGVFDS8519RZHK

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scRNA Lib 29
buenrostro-bernstein:scRNA Lib 29

Sequencing Results (Illumina)

16 items
fastq
reads
R1
2390
292 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1528
567 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1432
556 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2582
287 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2486
682 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1624
1.5 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1432
1.5 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2486
291 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1624
550 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1528
1.5 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1510
  • buenrostro-bernstein:Donor 1510
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 29
  • buenrostro-bernstein:scATAC Lib 29
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad