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IGVFDS8419ZMNL
IGVFDS8419ZMNL
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File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days
Protocols
https://www.protocols.io/file/rv9ucg3if.pdf
Aliases
harinder-singh:Bcells_don1_pitt_multiome_scRNAseq_day56_measurement
Attribution
Harinder Singh, University of Pittsburgh
(
HG012041
—
Harinder Singh
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1286IZXS
fastq
reads
I1
1
Illumina NovaSeq 6000
4
418 MB
Harinder Singh, University of Pittsburgh
validated
IGVFFI1333PJNQ
fastq
reads
R1
1
Read 1
Illumina NovaSeq 6000
2
1.3 GB
Harinder Singh, University of Pittsburgh
validated
IGVFFI1537OKCH
fastq
reads
R1
1
Read 1
Illumina NovaSeq 6000
4
1.3 GB
Harinder Singh, University of Pittsburgh
validated
IGVFFI1754THCG
fastq
reads
I2
1
Illumina NovaSeq 6000
3
457 MB
Harinder Singh, University of Pittsburgh
validated
IGVFFI2329UPXX
fastq
reads
R2
1
Read 2
Illumina NovaSeq 6000
1
2.7 GB
Harinder Singh, University of Pittsburgh
validated
IGVFFI4056YITN
fastq
reads
I1
1
Illumina NovaSeq 6000
1
412 MB
Harinder Singh, University of Pittsburgh
validated
IGVFFI5082TVJJ
fastq
reads
R2
1
Read 2
Illumina NovaSeq 6000
2
2.7 GB
Harinder Singh, University of Pittsburgh
validated
IGVFFI6116IAQX
fastq
reads
I2
1
Illumina NovaSeq 6000
4
454 MB
Harinder Singh, University of Pittsburgh
validated
IGVFFI6810NXEL
fastq
reads
I2
1
Illumina NovaSeq 6000
1
473 MB
Harinder Singh, University of Pittsburgh
validated
IGVFFI7053HMTF
fastq
reads
I2
1
Illumina NovaSeq 6000
2
460 MB
Harinder Singh, University of Pittsburgh
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM1056LJKY
InVitroSystem
B cell
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO9916UELD
harinder-singh:donor_1
male
Homo sapiens
File Sets Using This Measurement Set as an Input
1 item
Accession
Type
Summary
Aliases
Lab
IGVFDS9046UDPN
AnalysisSet
single-nucleus ATAC-seq (10x multiome), single-nucleus RNA sequencing assay (10x multiome)
harinder-singh:Bcells_don1_pitt_multiome_day56_analysis_set
Harinder Singh, University of Pittsburgh
Related Multiome Datasets
1 item
Accession
Type
Summary
Aliases
Lab
IGVFDS9764OTVQ
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
harinder-singh:Bcells_don1_pitt_multiome_scATACseq_day56_measurement
Harinder Singh, University of Pittsburgh