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IGVFDS8393AVUX

released
GRU
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 173)
Protocols
Aliases
buenrostro-bernstein:scRNA Lib 357
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
R1
3945
Read 1
22523KLT3
177 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3981
Barcode index
22523KLT3
90 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
3981
Read 1
22523KLT3
191 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3945
Read 2
22523KLT3
85 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3981
Read 2
22523KLT3
92 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3945
Barcode index
22523KLT3
84 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 173)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:scATAC Lib 402
Jason Buenrostro, Broad