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IGVFDS8366JHMT

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens (male, 26 years) bone marrow cell (cellular sub pool: SS-PKR 7)
Protocols
Aliases
bradley-bernstein:scATAC Lib 37
buenrostro-bernstein:scATAC Lib 37
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

16 items
Read Names
fastq
reads
R1
2597
633 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1639
6.6 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2597
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1735
6.3 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2309
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1543
7.9 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2501
638 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2309
636 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2405
639 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2405
1.1 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
PrimaryCell
Homo sapiens (male, 26 years) bone marrow cell (cellular sub pool: SS-PKR 7)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1506
  • buenrostro-bernstein:Donor 1506
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 37
  • buenrostro-bernstein:scRNA Lib 37
Jason Buenrostro, Broad