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IGVFDS8346OZIZ

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (26 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 43
buenrostro-bernstein:scATAC Lib 43

Sequencing Results (Illumina)

16 items
Read Names
fastq
reads
R2
1747
5.3 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2321
578 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1459
3.3 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1459
6.1 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1555
3.3 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2321
988 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2609
979 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1651
5.2 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1651
2.8 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1747
2.9 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (26 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1506
  • buenrostro-bernstein:Donor 1506
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 43
  • buenrostro-bernstein:scRNA Lib 43
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad