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IGVFDS8305QDVA

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 188)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 494
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
R1
9170
Read 1
22LMVNLT4
633 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8882
Read 1
22LMVNLT4
674 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
952
Read 2
22773CLT3
438 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1078
Barcode index
22773CLT3
384 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8690
Barcode index
22LMVNLT4
394 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1078
Read 1
22773CLT3
907 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8498
Read 1
22LMVNLT4
694 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9074
Read 1
22LMVNLT4
665 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1036
Barcode index
22773CLT3
391 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1078
Read 2
22773CLT3
435 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 188)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 449
Jason Buenrostro, Broad