Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
MeasurementSet
/
IGVFDS8293KTMP
IGVFDS8293KTMP
released
No limitations
Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 9 days
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C38_day9
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0674BWNB
fastq
reads
R2
1
Illumina NovaSeq X
6
3.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI2150EGOD
fastq
reads
R2
1
Illumina NovaSeq X
4
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI2754RNXP
fastq
reads
R1
1
Illumina NovaSeq X
4
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI2881SIWK
fastq
reads
R2
1
Illumina NovaSeq X
2
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI2916VNYA
fastq
reads
R2
1
Illumina NovaSeq X
1
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI3412PXDV
fastq
reads
R1
1
Illumina NovaSeq X
1
3.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI4092TTDE
fastq
reads
R2
1
Illumina NovaSeq X
3
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI4248ZCQI
fastq
reads
R2
1
Illumina NovaSeq X
8
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI4280CBOT
fastq
reads
R1
1
Illumina NovaSeq X
2
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI5845QXMT
fastq
reads
R2
1
Illumina NovaSeq X
7
3.4 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM1709WMSR
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 9 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO2328XGNY
chongyuan-luo:C38
unspecified
Homo sapiens