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IGVFDS8287AFDU

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File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (female, 30.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 35.0 years) peripheral blood mononuclear cell; ... and 18 more samples
Protocols
Aliases
jimmie-ye:XX14-SC1_snRNA
Attribution
Jimmie Ye, UCSF

Sequencing Results (Illumina)

12 items
Read Names
fastq
reads
I1
189
2.0 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
189
Read 2
13 GB
Jimmie Ye, UCSF
validated
fastq
reads
I2
188
1.9 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
188
2.0 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
188
Read 1
8.1 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
188
Read 2
13 GB
Jimmie Ye, UCSF
validated
fastq
reads
I2
189
1.9 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
189
Read 1
8.0 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
187
2.0 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
187
Read 2
13 GB
Jimmie Ye, UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 30.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 35.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Donors

20 items
Aliases
  • jimmie-ye:donor_196
female
Homo sapiens
  • jimmie-ye:donor_241
male
Homo sapiens
  • jimmie-ye:donor_276
male
Homo sapiens
  • jimmie-ye:donor_225
female
Homo sapiens
  • jimmie-ye:donor_259
female
Homo sapiens
  • jimmie-ye:donor_251
male
Homo sapiens
  • jimmie-ye:donor_67
female
Homo sapiens
  • jimmie-ye:donor_255
male
Homo sapiens
  • jimmie-ye:donor_249
female
Homo sapiens
  • jimmie-ye:donor_237
female
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • jimmie-ye:XX14-SC1_snATAC
Jimmie Ye, UCSF