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IGVFDS8255ZBNK

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus CASTJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 500)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 1477
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R1
7387
Read 1
22KFLYLT3
7.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
7381
Read 1
22KFLYLT3
7.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
7381
Read 2, Barcode index
22KFLYLT3
11 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
7387
Read 2, Barcode index
22KFLYLT3
11 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus CASTJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 500)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • ali-mortazavi:777_CASTJ_10M
  • buenrostro-bernstein:Donor 2073
male
Mus musculus

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 795
Jason Buenrostro, Broad