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IGVFDS8131BLMU

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 171)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 392
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

45 items
Read Names
fastq
reads
R2
922
Read 2
22773CLT3
100 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4019
Read 2
22523KLT3
745 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4055
Barcode index
22523KLT3
634 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4055
Read 2
22523KLT3
749 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4091
Read 1
22523KLT3
1.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9014
Read 2
22LMVNLT4
2.1 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4091
Read 2
22523KLT3
752 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8822
Read 1
22LMVNLT4
2.2 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9110
Read 1
22LMVNLT4
2.1 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4019
Read 1
22523KLT3
1.6 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 171)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 419
Jason Buenrostro, Broad