IGVFDS8082SQQI

{
    "@context": "/terms/",
    "@id": "/measurement-sets/IGVFDS8082SQQI/",
    "@type": [
        "MeasurementSet",
        "FileSet",
        "Item"
    ],
    "accession": "IGVFDS8082SQQI",
    "aliases": [
        "igvf:corces_measurementSet_RP028_G2_RNA"
    ],
    "assay_term": {
        "@id": "/assay-terms/OBI_0003109/",
        "assay_slims": [
            "gene expression"
        ],
        "status": "released",
        "term_name": "single-nucleus RNA sequencing assay"
    },
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [416ac19b-be8b-4230-b781-ac2ad4d72ca0](/phenotypic-features/416ac19b-be8b-4230-b781-ac2ad4d72ca0/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO9028PIDF/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [101b5ed8-c92e-433b-a591-b7bef11037b5](/phenotypic-features/101b5ed8-c92e-433b-a591-b7bef11037b5/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO9028PIDF/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [d5720da2-f518-4f62-ab22-531e43e00201](/phenotypic-features/d5720da2-f518-4f62-ab22-531e43e00201/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO9028PIDF/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [ab7e4cfe-ea26-4525-ab85-dd11e60815e3](/phenotypic-features/ab7e4cfe-ea26-4525-ab85-dd11e60815e3/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO9028PIDF/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [5a2e0d6a-6c20-4740-9cc9-f6eb1f00bee8](/phenotypic-features/5a2e0d6a-6c20-4740-9cc9-f6eb1f00bee8/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO3501RYHX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [9306bbc1-b3a4-41f0-8fe3-03e191b98d99](/phenotypic-features/9306bbc1-b3a4-41f0-8fe3-03e191b98d99/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO3501RYHX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [5dc91db6-1de5-4f9b-86fa-9470048ff8fb](/phenotypic-features/5dc91db6-1de5-4f9b-86fa-9470048ff8fb/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO3501RYHX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [ff6e836f-a0c6-4006-981a-358d2d3a7c03](/phenotypic-features/ff6e836f-a0c6-4006-981a-358d2d3a7c03/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO3501RYHX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [e82bb1f8-5de0-4d91-84d6-0d77ad1f2bc1](/phenotypic-features/e82bb1f8-5de0-4d91-84d6-0d77ad1f2bc1/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO3501RYHX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [8dbc3bc3-9a27-4c5c-8796-75440e1d5e6d](/phenotypic-features/8dbc3bc3-9a27-4c5c-8796-75440e1d5e6d/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO3501RYHX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [457ba560-b6d1-4bea-b7fa-c043ca79ab7b](/phenotypic-features/457ba560-b6d1-4bea-b7fa-c043ca79ab7b/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO0411QFOF/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [fff30f45-9273-47a0-847f-0619e27db9f1](/phenotypic-features/fff30f45-9273-47a0-847f-0619e27db9f1/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO0411QFOF/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [f002bd57-9c69-46f5-baeb-02ef36f0ae95](/phenotypic-features/f002bd57-9c69-46f5-baeb-02ef36f0ae95/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO0411QFOF/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [b9914545-281c-4c85-add2-46440dec3556](/phenotypic-features/b9914545-281c-4c85-add2-46440dec3556/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO0411QFOF/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [99530794-7cba-40b4-a9d0-816f682a6751](/phenotypic-features/99530794-7cba-40b4-a9d0-816f682a6751/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO0411QFOF/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [e469ed8e-b7b3-43ab-911f-20f855038419](/phenotypic-features/e469ed8e-b7b3-43ab-911f-20f855038419/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO0411QFOF/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO8670MHXE](/human-donors/IGVFDO8670MHXE/) has in progress subobject phenotypic feature [a06929df-06de-4952-af29-dd3beadf792f](/phenotypic-features/a06929df-06de-4952-af29-dd3beadf792f/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO8670MHXE/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO8670MHXE](/human-donors/IGVFDO8670MHXE/) has in progress subobject phenotypic feature [f32d9b8c-4e38-489a-8a87-0b307a6a8fc2](/phenotypic-features/f32d9b8c-4e38-489a-8a87-0b307a6a8fc2/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO8670MHXE/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO8670MHXE](/human-donors/IGVFDO8670MHXE/) has in progress subobject phenotypic feature [cb91524a-966f-4fc4-b3b8-5b1f5e9f7cd5](/phenotypic-features/cb91524a-966f-4fc4-b3b8-5b1f5e9f7cd5/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO8670MHXE/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO8670MHXE](/human-donors/IGVFDO8670MHXE/) has in progress subobject phenotypic feature [a0abf74d-a52a-440e-93a8-2efe26c75d7e](/phenotypic-features/a0abf74d-a52a-440e-93a8-2efe26c75d7e/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO8670MHXE/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO8670MHXE](/human-donors/IGVFDO8670MHXE/) has in progress subobject phenotypic feature [1cc41731-96a5-4b5b-8310-74a2a3d6a4c8](/phenotypic-features/1cc41731-96a5-4b5b-8310-74a2a3d6a4c8/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO8670MHXE/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [d0cc65d7-25b6-4677-bb6b-fa3ad7d9776c](/phenotypic-features/d0cc65d7-25b6-4677-bb6b-fa3ad7d9776c/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO6489DOPG/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [d0131e87-f69e-47de-a1f5-7dbda60dabef](/phenotypic-features/d0131e87-f69e-47de-a1f5-7dbda60dabef/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO6489DOPG/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [ed38e086-4d93-4d45-b2c4-e92658dbdb57](/phenotypic-features/ed38e086-4d93-4d45-b2c4-e92658dbdb57/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO6489DOPG/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [5113685b-3e4a-4985-b418-d5b8a80c88fc](/phenotypic-features/5113685b-3e4a-4985-b418-d5b8a80c88fc/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO6489DOPG/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [5c44a3b3-503c-4045-becf-3e8a1f74fb42](/phenotypic-features/5c44a3b3-503c-4045-becf-3e8a1f74fb42/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO6489DOPG/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [d1b8d684-9089-4797-b468-e66e6208a6a4](/phenotypic-features/d1b8d684-9089-4797-b468-e66e6208a6a4/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO6489DOPG/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [b2b44f93-e621-43f7-80a5-3d1b73a794b2](/phenotypic-features/b2b44f93-e621-43f7-80a5-3d1b73a794b2/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO6513APBX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [8442786a-d708-482c-8764-201d14e47680](/phenotypic-features/8442786a-d708-482c-8764-201d14e47680/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO6513APBX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [68fe3a71-6fc0-47e8-834c-794714585a7e](/phenotypic-features/68fe3a71-6fc0-47e8-834c-794714585a7e/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO6513APBX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [08a4bc6e-1d5d-46df-92f0-6085a35a75a7](/phenotypic-features/08a4bc6e-1d5d-46df-92f0-6085a35a75a7/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO6513APBX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [e60abb08-e197-449b-8eb8-7172db9d3bac](/phenotypic-features/e60abb08-e197-449b-8eb8-7172db9d3bac/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO6513APBX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO8800RKVB](/human-donors/IGVFDO8800RKVB/) has in progress subobject phenotypic feature [1e6fcee5-5039-4c6f-86fc-6271a4ccbc72](/phenotypic-features/1e6fcee5-5039-4c6f-86fc-6271a4ccbc72/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO8800RKVB/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO8800RKVB](/human-donors/IGVFDO8800RKVB/) has in progress subobject phenotypic feature [d42b2763-dab2-4434-a2ff-90f908a90db1](/phenotypic-features/d42b2763-dab2-4434-a2ff-90f908a90db1/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO8800RKVB/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO8800RKVB](/human-donors/IGVFDO8800RKVB/) has in progress subobject phenotypic feature [4f2de9a0-55d4-4474-973d-63b58cb1b930](/phenotypic-features/4f2de9a0-55d4-4474-973d-63b58cb1b930/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO8800RKVB/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO8800RKVB](/human-donors/IGVFDO8800RKVB/) has in progress subobject phenotypic feature [0ba97096-19d9-4d59-873a-9ca2c42354f0](/phenotypic-features/0ba97096-19d9-4d59-873a-9ca2c42354f0/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO8800RKVB/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO8800RKVB](/human-donors/IGVFDO8800RKVB/) has in progress subobject phenotypic feature [4bba57b2-fe4e-46c7-ace5-64469134b74a](/phenotypic-features/4bba57b2-fe4e-46c7-ace5-64469134b74a/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO8800RKVB/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [f5b4fdb4-cb5d-403a-9c5c-6208c6a3624e](/phenotypic-features/f5b4fdb4-cb5d-403a-9c5c-6208c6a3624e/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO1302YEPX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [83351a5f-d758-46ad-b40e-64f2557e39e8](/phenotypic-features/83351a5f-d758-46ad-b40e-64f2557e39e8/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO1302YEPX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [29eaabd2-1a32-481b-a752-2735f7051661](/phenotypic-features/29eaabd2-1a32-481b-a752-2735f7051661/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO1302YEPX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [36d319d6-1788-48ea-a5f8-3153454ccab7](/phenotypic-features/36d319d6-1788-48ea-a5f8-3153454ccab7/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO1302YEPX/"
            },
            {
                "category": "mismatched status",
                "detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [957cdcbe-cef4-45fe-94f2-d2bb63ed5e05](/phenotypic-features/957cdcbe-cef4-45fe-94f2-d2bb63ed5e05/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO1302YEPX/"
            }
        ],
        "NOT_COMPLIANT": [
            {
                "category": "missing sequence specification",
                "detail": "Measurement set [IGVFDS8082SQQI](/measurement-sets/IGVFDS8082SQQI/) has sequence file(s): [IGVFFI4188PFAU](/sequence-files/IGVFFI4188PFAU/), [IGVFFI1889CITR](/sequence-files/IGVFFI1889CITR/), [IGVFFI7620NGUA](/sequence-files/IGVFFI7620NGUA/), [IGVFFI9327VUEO](/sequence-files/IGVFFI9327VUEO/), [IGVFFI4029PTCT](/sequence-files/IGVFFI4029PTCT/), [IGVFFI5078PWJY](/sequence-files/IGVFFI5078PWJY/), [IGVFFI7563GPDC](/sequence-files/IGVFFI7563GPDC/), [IGVFFI1924FBZB](/sequence-files/IGVFFI1924FBZB/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
                "level": 50,
                "level_name": "NOT_COMPLIANT",
                "name": "audit_missing_seqspec",
                "path": "/measurement-sets/IGVFDS8082SQQI/"
            },
            {
                "category": "missing strand specificity",
                "detail": "Measurement set [IGVFDS8082SQQI](/measurement-sets/IGVFDS8082SQQI/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
                "level": 50,
                "level_name": "NOT_COMPLIANT",
                "name": "audit_missing_strand_specificity",
                "path": "/measurement-sets/IGVFDS8082SQQI/"
            }
        ],
        "WARNING": [
            {
                "category": "missing analysis",
                "detail": "Measurement set [IGVFDS8082SQQI](/measurement-sets/IGVFDS8082SQQI/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_input_for",
                "path": "/measurement-sets/IGVFDS8082SQQI/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG012076/",
        "component": "mapping",
        "contact_pi": {
            "@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
            "title": "Ansuman Satpathy"
        },
        "title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
    },
    "control_for": [],
    "controlled_access": false,
    "creation_timestamp": "2025-03-19T21:45:29.636808+00:00",
    "data_use_limitation_summaries": [
        "No limitations"
    ],
    "donors": [
        {
            "@id": "/human-donors/IGVFDO9028PIDF/",
            "accession": "IGVFDO9028PIDF",
            "aliases": [
                "igvf:corces_donor_BANN1637"
            ],
            "sex": "male",
            "status": "preview",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO8670MHXE/",
            "accession": "IGVFDO8670MHXE",
            "aliases": [
                "igvf:corces_donor_BANN0874"
            ],
            "sex": "female",
            "status": "preview",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO3501RYHX/",
            "accession": "IGVFDO3501RYHX",
            "aliases": [
                "igvf:corces_donor_BANN1959"
            ],
            "sex": "male",
            "status": "preview",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO6489DOPG/",
            "accession": "IGVFDO6489DOPG",
            "aliases": [
                "igvf:corces_donor_BANN2118"
            ],
            "sex": "female",
            "status": "preview",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO8800RKVB/",
            "accession": "IGVFDO8800RKVB",
            "aliases": [
                "igvf:corces_donor_BANN1872"
            ],
            "sex": "female",
            "status": "preview",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO1302YEPX/",
            "accession": "IGVFDO1302YEPX",
            "aliases": [
                "igvf:corces_donor_BANN0215"
            ],
            "sex": "female",
            "status": "preview",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO6513APBX/",
            "accession": "IGVFDO6513APBX",
            "aliases": [
                "igvf:corces_donor_BANN0210"
            ],
            "sex": "male",
            "status": "preview",
            "taxa": "Homo sapiens"
        },
        {
            "@id": "/human-donors/IGVFDO0411QFOF/",
            "accession": "IGVFDO0411QFOF",
            "aliases": [
                "igvf:corces_donor_BANN1750"
            ],
            "sex": "male",
            "status": "preview",
            "taxa": "Homo sapiens"
        }
    ],
    "externally_hosted": false,
    "file_set_type": "experimental data",
    "files": [
        {
            "@id": "/sequence-files/IGVFFI4188PFAU/",
            "accession": "IGVFFI4188PFAU",
            "aliases": [
                "igvf:corces_sequenceFile_RNA_RP028_G2_P076_L006_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2025-03-21T00:20:59.194781+00:00",
            "file_format": "fastq",
            "file_size": 1067077551,
            "href": "/sequence-files/IGVFFI4188PFAU/@@download/IGVFFI4188PFAU.fastq.gz",
            "s3_uri": "s3://igvf-files/2025/03/21/e58ade17-4f46-49cf-a7b0-34efa8064f43/IGVFFI4188PFAU.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "Multiome_RNA_RP028_G2_L002_P076_S58_L006_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI1889CITR/",
            "accession": "IGVFFI1889CITR",
            "aliases": [
                "igvf:corces_sequenceFile_RNA_RP028_G2_P076_L005_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2025-03-21T00:20:54.826047+00:00",
            "file_format": "fastq",
            "file_size": 9569835797,
            "href": "/sequence-files/IGVFFI1889CITR/@@download/IGVFFI1889CITR.fastq.gz",
            "s3_uri": "s3://igvf-files/2025/03/21/435785d8-5243-4ecf-8995-554c71180357/IGVFFI1889CITR.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "Multiome_RNA_RP028_G2_L002_P076_S58_L005_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7620NGUA/",
            "accession": "IGVFFI7620NGUA",
            "aliases": [
                "igvf:corces_sequenceFile_RNA_RP028_G2_P076_L006_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2025-03-21T00:21:03.363468+00:00",
            "file_format": "fastq",
            "file_size": 955138268,
            "href": "/sequence-files/IGVFFI7620NGUA/@@download/IGVFFI7620NGUA.fastq.gz",
            "s3_uri": "s3://igvf-files/2025/03/21/c0a8a241-5969-4a3c-9b91-5b6fb3c83f6b/IGVFFI7620NGUA.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "Multiome_RNA_RP028_G2_L002_P076_S58_L006_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI9327VUEO/",
            "accession": "IGVFFI9327VUEO",
            "aliases": [
                "igvf:corces_sequenceFile_RNA_RP028_G2_P076_L006_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2025-03-21T00:21:07.282142+00:00",
            "file_format": "fastq",
            "file_size": 13073633679,
            "href": "/sequence-files/IGVFFI9327VUEO/@@download/IGVFFI9327VUEO.fastq.gz",
            "s3_uri": "s3://igvf-files/2025/03/21/dbd3c002-85a2-4308-ad1a-cb3620fbab68/IGVFFI9327VUEO.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "Multiome_RNA_RP028_G2_L002_P076_S58_L006_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI4029PTCT/",
            "accession": "IGVFFI4029PTCT",
            "aliases": [
                "igvf:corces_sequenceFile_RNA_RP028_G2_P076_L006_R2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2025-03-21T00:21:11.026415+00:00",
            "file_format": "fastq",
            "file_size": 9901150326,
            "href": "/sequence-files/IGVFFI4029PTCT/@@download/IGVFFI4029PTCT.fastq.gz",
            "s3_uri": "s3://igvf-files/2025/03/21/40c41407-0d48-4064-b254-f3aa54053fee/IGVFFI4029PTCT.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "Multiome_RNA_RP028_G2_L002_P076_S58_L006_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI5078PWJY/",
            "accession": "IGVFFI5078PWJY",
            "aliases": [
                "igvf:corces_sequenceFile_RNA_RP028_G2_P076_L005_I2"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2025-03-21T00:20:47.691323+00:00",
            "file_format": "fastq",
            "file_size": 918483504,
            "href": "/sequence-files/IGVFFI5078PWJY/@@download/IGVFFI5078PWJY.fastq.gz",
            "s3_uri": "s3://igvf-files/2025/03/21/ee4f21b7-468c-47ea-8207-9d7158789bda/IGVFFI5078PWJY.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "Multiome_RNA_RP028_G2_L002_P076_S58_L005_I2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI7563GPDC/",
            "accession": "IGVFFI7563GPDC",
            "aliases": [
                "igvf:corces_sequenceFile_RNA_RP028_G2_P076_L005_R1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2025-03-21T00:20:51.096528+00:00",
            "file_format": "fastq",
            "file_size": 12703935895,
            "href": "/sequence-files/IGVFFI7563GPDC/@@download/IGVFFI7563GPDC.fastq.gz",
            "s3_uri": "s3://igvf-files/2025/03/21/ac38d5c8-3b16-47c8-afb6-a34f7de3d416/IGVFFI7563GPDC.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "Multiome_RNA_RP028_G2_L002_P076_S58_L005_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI1924FBZB/",
            "accession": "IGVFFI1924FBZB",
            "aliases": [
                "igvf:corces_sequenceFile_RNA_RP028_G2_P076_L005_I1"
            ],
            "content_type": "reads",
            "controlled_access": false,
            "creation_timestamp": "2025-03-21T00:20:41.819441+00:00",
            "file_format": "fastq",
            "file_size": 1035829492,
            "href": "/sequence-files/IGVFFI1924FBZB/@@download/IGVFFI1924FBZB.fastq.gz",
            "s3_uri": "s3://igvf-files/2025/03/21/2bae610a-2757-4d44-9eb7-98e191160954/IGVFFI1924FBZB.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0022840/",
                "status": "released",
                "term_name": "Illumina NovaSeq X"
            },
            "status": "preview",
            "submitted_file_name": "Multiome_RNA_RP028_G2_L002_P076_S58_L005_I1_001.fastq.gz",
            "upload_status": "validated"
        }
    ],
    "input_for": [],
    "lab": {
        "@id": "/labs/ryan-corces/",
        "title": "Ryan Corces, Gladstone Institute UCSF"
    },
    "multiome_size": 2,
    "onlist_files": [
        "/tabular-files/IGVFFI8751YQRY/"
    ],
    "onlist_method": "no combination",
    "preferred_assay_title": "10x multiome",
    "protocols": [
        "https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
    ],
    "related_multiome_datasets": [
        {
            "@id": "/measurement-sets/IGVFDS2559EFEW/",
            "accession": "IGVFDS2559EFEW",
            "status": "preview"
        }
    ],
    "samples": [
        {
            "@id": "/multiplexed-samples/IGVFSM1273LHSM/",
            "@type": [
                "MultiplexedSample",
                "Sample",
                "Item"
            ],
            "accession": "IGVFSM1273LHSM",
            "aliases": [
                "igvf:corces_multiplexedSample_RP028_G2"
            ],
            "classifications": [
                "tissue",
                "multiplexed sample"
            ],
            "disease_terms": [
                {
                    "@id": "/phenotype-terms/DOID_0080832/",
                    "status": "in progress",
                    "term_name": "mild cognitive impairment"
                },
                {
                    "@id": "/phenotype-terms/DOID_14330/",
                    "status": "in progress",
                    "term_name": "Parkinson's disease"
                },
                {
                    "@id": "/phenotype-terms/DOID_9246/",
                    "status": "in progress",
                    "term_name": "cerebral amyloid angiopathy"
                },
                {
                    "@id": "/phenotype-terms/MONDO_0004975/",
                    "status": "released",
                    "term_name": "Alzheimer disease"
                }
            ],
            "institutional_certificates": [
                {
                    "@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
                    "certificate_identifier": "IP115-05",
                    "controlled_access": false,
                    "status": "in progress"
                }
            ],
            "modifications": [],
            "sample_terms": [
                {
                    "@id": "/sample-terms/UBERON_0001874/",
                    "@type": [
                        "SampleTerm",
                        "OntologyTerm",
                        "Item"
                    ],
                    "status": "preview",
                    "summary": "putamen",
                    "term_name": "putamen"
                },
                {
                    "@id": "/sample-terms/UBERON_0002038/",
                    "@type": [
                        "SampleTerm",
                        "OntologyTerm",
                        "Item"
                    ],
                    "status": "preview",
                    "summary": "substantia nigra",
                    "term_name": "substantia nigra"
                },
                {
                    "@id": "/sample-terms/UBERON_0002740/",
                    "@type": [
                        "SampleTerm",
                        "OntologyTerm",
                        "Item"
                    ],
                    "status": "preview",
                    "summary": "posterior cingulate gyrus",
                    "term_name": "posterior cingulate gyrus"
                },
                {
                    "@id": "/sample-terms/UBERON_0002771/",
                    "@type": [
                        "SampleTerm",
                        "OntologyTerm",
                        "Item"
                    ],
                    "status": "preview",
                    "summary": "middle temporal gyrus",
                    "term_name": "middle temporal gyrus"
                }
            ],
            "status": "preview",
            "summary": "multiplexed sample: Homo sapiens (female, 84 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; Homo sapiens (male, 70 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease; ... and 6 more samples",
            "taxa": "Homo sapiens",
            "treatments": []
        }
    ],
    "schema_version": "26",
    "status": "preview",
    "submitted_by": {
        "@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
        "title": "Ryan Corces"
    },
    "submitted_files_timestamp": "2025-03-21T00:20:41.819441+00:00",
    "summary": "single-nucleus RNA sequencing assay (10x multiome)",
    "uuid": "e99817d1-aff1-42b9-8ea7-8311c7a91c56"
}