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IGVFDS8001MFIY

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 1), female, Homo sapiens (19 years)
Protocols
Aliases
bradley-bernstein:scRNA Lib 2
buenrostro-bernstein:scRNA Lib 2

Sequencing Results (Illumina)

16 items
fastq
reads
R2
2432
1.5 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1474
760 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2432
624 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2528
611 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1570
2.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2336
1.5 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2240
1.5 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1666
728 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1666
2.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1378
2.0 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 1), female, Homo sapiens (19 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1508
  • buenrostro-bernstein:Donor 1508
female
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 2
  • buenrostro-bernstein:scATAC Lib 2
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad