IGVFDS7889GEQS

released
{
    "@context": "/terms/",
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        "MeasurementSet",
        "FileSet",
        "Item"
    ],
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        "chongyuan-luo:pgp_snmct_C39_day3"
    ],
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        "@id": "/assay-terms/OBI_0003662/",
        "assay_slims": [
            "multiome"
        ],
        "status": "released",
        "term_name": "single-nucleus methylcytosine and transcriptome sequencing assay"
    },
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "missing sequence specification",
                "detail": "Measurement set [IGVFDS7889GEQS](/measurement-sets/IGVFDS7889GEQS/) has sequence file(s): [IGVFFI3403WBPL](/sequence-files/IGVFFI3403WBPL/), [IGVFFI1055BFIR](/sequence-files/IGVFFI1055BFIR/), [IGVFFI3020NEOA](/sequence-files/IGVFFI3020NEOA/), [IGVFFI9776GAAH](/sequence-files/IGVFFI9776GAAH/), [IGVFFI0915BQHY](/sequence-files/IGVFFI0915BQHY/), [IGVFFI5029HGQI](/sequence-files/IGVFFI5029HGQI/), [IGVFFI5628TGDN](/sequence-files/IGVFFI5628TGDN/), [IGVFFI7093FHGJ](/sequence-files/IGVFFI7093FHGJ/) which do not have any `seqspecs`. Sequence files in a file set associated with bulk data are expected to link to a sequence specification file.",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_missing_seqspec",
                "path": "/measurement-sets/IGVFDS7889GEQS/"
            }
        ],
        "WARNING": [
            {
                "category": "missing analysis",
                "detail": "Measurement set [IGVFDS7889GEQS](/measurement-sets/IGVFDS7889GEQS/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_input_for",
                "path": "/measurement-sets/IGVFDS7889GEQS/"
            }
        ]
    },
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            "@id": "/users/53ea51d1-5c61-4f1e-99fb-ef857bd652a3/",
            "title": "Chongyuan Luo"
        },
        "title": "Leveraging genetic variation to dissect gene regulatory networks of reprogramming to pluripotency"
    },
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    "creation_timestamp": "2024-11-15T19:28:38.945886+00:00",
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        }
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    "lab": {
        "@id": "/labs/chongyuan-luo/",
        "title": "Chongyuan Luo, UCLA"
    },
    "preferred_assay_title": "snMCT-seq",
    "protocols": [
        "https://www.protocols.io/view/snmcat-v2-x54v9jby1g3e/v2"
    ],
    "release_timestamp": "2025-02-11T00:54:56.593195+00:00",
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            "@id": "/in-vitro-systems/IGVFSM6688THZN/",
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                "Biosample",
                "Sample",
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                "chongyuan-luo:C39_day3"
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                    "@type": [
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                    "summary": "fibroblast",
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            ],
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            "summary": "fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 3 days, Homo sapiens",
            "targeted_sample_term": {
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        "title": "Terence Li"
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    "summary": "snMCT-seq",
    "uuid": "98190854-b4c2-4e2f-b405-f58842c78b8b"
}