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IGVFDS7859EYQR
IGVFDS7859EYQR
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This object is in preview status. Metadata is subject to change until this object is released.
File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days
Protocols
https://www.protocols.io/file/rv9ucg3if.pdf
Aliases
harinder-singh:Bcells_don1_pitt_multiome_scRNAseq_day012_measurement
Attribution
Harinder Singh, University of Pittsburgh
(
HG012041
—
Harinder Singh
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0486KRGW
fastq
reads
I2
1
Illumina NovaSeq 6000
3
379 MB
Harinder Singh, University of Pittsburgh
validated
IGVFFI0633YPSK
fastq
reads
R2
1
Read 2
Illumina NovaSeq 6000
4
2.3 GB
Harinder Singh, University of Pittsburgh
validated
IGVFFI2989ICSG
fastq
reads
I1
1
Illumina NovaSeq 6000
3
385 MB
Harinder Singh, University of Pittsburgh
validated
IGVFFI3433YEFI
fastq
reads
R2
1
Read 2
Illumina NovaSeq 6000
2
2.3 GB
Harinder Singh, University of Pittsburgh
validated
IGVFFI3482VZAG
fastq
reads
R1
1
Read 1
Illumina NovaSeq 6000
1
1.2 GB
Harinder Singh, University of Pittsburgh
validated
IGVFFI3557HDSC
fastq
reads
R1
1
Read 1
Illumina NovaSeq 6000
4
1.2 GB
Harinder Singh, University of Pittsburgh
validated
IGVFFI3653OYSB
fastq
reads
R1
1
Read 1
Illumina NovaSeq 6000
3
1.2 GB
Harinder Singh, University of Pittsburgh
validated
IGVFFI3739JOEC
fastq
reads
R1
1
Read 1
Illumina NovaSeq 6000
2
1.2 GB
Harinder Singh, University of Pittsburgh
validated
IGVFFI4080SDQJ
fastq
reads
I2
1
Illumina NovaSeq 6000
1
401 MB
Harinder Singh, University of Pittsburgh
validated
IGVFFI4355VZKC
fastq
reads
R2
1
Read 2
Illumina NovaSeq 6000
3
2.3 GB
Harinder Singh, University of Pittsburgh
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM8093SHHZ
InVitroSystem
B cell
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 2 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO9916UELD
harinder-singh:donor_1
male
Homo sapiens
File Sets Using This Measurement Set as an Input
1 item
Accession
Type
Summary
Aliases
Lab
IGVFDS4340KVZI
AnalysisSet
single-nucleus ATAC-seq (10x multiome), single-nucleus RNA sequencing assay (10x multiome)
harinder-singh:Bcells_don1_pitt_multiome_day012_analysis_set
Harinder Singh, University of Pittsburgh
Related Multiome Datasets
1 item
Accession
Type
Summary
Aliases
Lab
IGVFDS4024LHFB
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
harinder-singh:Bcells_don1_pitt_multiome_scATACseq_day012_measurement
Harinder Singh, University of Pittsburgh