{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS7843JHRO/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS7843JHRO",
"aliases": [
"igvf:corces_measurementSet_X041_G4_ATAC"
],
"assay_term": {
"@id": "/assay-terms/OBI_0002762/",
"assay_slims": [
"chromatin accessibility"
],
"status": "released",
"term_name": "single-nucleus ATAC-seq"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [93e7b543-5ab9-4cb4-8a10-9d9a7b950b6b](/phenotypic-features/93e7b543-5ab9-4cb4-8a10-9d9a7b950b6b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [ef944fd3-8635-4e0f-bad8-48136e7c6408](/phenotypic-features/ef944fd3-8635-4e0f-bad8-48136e7c6408/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [025a53bb-7c23-42cb-9752-3516f17f6187](/phenotypic-features/025a53bb-7c23-42cb-9752-3516f17f6187/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [d900f184-9bf7-4b9c-8d20-0d40c6b16435](/phenotypic-features/d900f184-9bf7-4b9c-8d20-0d40c6b16435/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [cd2525eb-a90d-47c1-a053-cd3376cd23d1](/phenotypic-features/cd2525eb-a90d-47c1-a053-cd3376cd23d1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [1961d5fc-9987-47f0-8cdf-9dae2203185c](/phenotypic-features/1961d5fc-9987-47f0-8cdf-9dae2203185c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [4fa3d51f-faa7-48b9-b76b-58bbb23ba4cb](/phenotypic-features/4fa3d51f-faa7-48b9-b76b-58bbb23ba4cb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [4a89566b-e6ee-4846-b48a-601a52c201ab](/phenotypic-features/4a89566b-e6ee-4846-b48a-601a52c201ab/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [fc1de29e-57a0-4cdb-ac92-597485b27795](/phenotypic-features/fc1de29e-57a0-4cdb-ac92-597485b27795/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [b1bcbcb3-200c-4716-b4cc-8cc2cc3ee208](/phenotypic-features/b1bcbcb3-200c-4716-b4cc-8cc2cc3ee208/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [9109c230-248d-47c3-9cff-73daf2db597a](/phenotypic-features/9109c230-248d-47c3-9cff-73daf2db597a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [3f62e325-e003-4f54-a5ed-1e5ab90bffbb](/phenotypic-features/3f62e325-e003-4f54-a5ed-1e5ab90bffbb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [3e3c67a3-add2-494d-a64d-c47dd7d5c897](/phenotypic-features/3e3c67a3-add2-494d-a64d-c47dd7d5c897/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [a04cdee4-28e8-4690-acb4-48bab45f7927](/phenotypic-features/a04cdee4-28e8-4690-acb4-48bab45f7927/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [78a7c349-10a5-4b5a-9661-21b6831612a7](/phenotypic-features/78a7c349-10a5-4b5a-9661-21b6831612a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [b680dc57-e349-4ea9-8cb8-5c5426aaad31](/phenotypic-features/b680dc57-e349-4ea9-8cb8-5c5426aaad31/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [a8a7eb19-35fc-4266-87cf-32ecd8e25f0b](/phenotypic-features/a8a7eb19-35fc-4266-87cf-32ecd8e25f0b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [7cef33e4-2883-4036-9171-f05b4ad41d82](/phenotypic-features/7cef33e4-2883-4036-9171-f05b4ad41d82/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [b4caab48-6ad6-435d-b7d8-5fd75adcb6f9](/phenotypic-features/b4caab48-6ad6-435d-b7d8-5fd75adcb6f9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [ce38b3de-52ef-4922-90a9-554f69f41f83](/phenotypic-features/ce38b3de-52ef-4922-90a9-554f69f41f83/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [cb846c22-2896-4683-83db-d4839ff90635](/phenotypic-features/cb846c22-2896-4683-83db-d4839ff90635/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [bf330bc2-8a2a-4dc7-8aeb-f572a5fe9f1d](/phenotypic-features/bf330bc2-8a2a-4dc7-8aeb-f572a5fe9f1d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [63252125-58f4-4e29-91f3-4103a1645797](/phenotypic-features/63252125-58f4-4e29-91f3-4103a1645797/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0698ZMAQ](/human-donors/IGVFDO0698ZMAQ/) has in progress subobject phenotypic feature [4e7ec6ce-25f7-4406-95f3-0908c9636077](/phenotypic-features/4e7ec6ce-25f7-4406-95f3-0908c9636077/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0698ZMAQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0698ZMAQ](/human-donors/IGVFDO0698ZMAQ/) has in progress subobject phenotypic feature [c2348b93-2f59-4084-a1e7-62d405d2d45d](/phenotypic-features/c2348b93-2f59-4084-a1e7-62d405d2d45d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0698ZMAQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0698ZMAQ](/human-donors/IGVFDO0698ZMAQ/) has in progress subobject phenotypic feature [9c734026-0ef7-4063-b4fb-c186851d22b7](/phenotypic-features/9c734026-0ef7-4063-b4fb-c186851d22b7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0698ZMAQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0698ZMAQ](/human-donors/IGVFDO0698ZMAQ/) has in progress subobject phenotypic feature [2697c4cf-ae1b-4527-94d7-468cc278827c](/phenotypic-features/2697c4cf-ae1b-4527-94d7-468cc278827c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0698ZMAQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0698ZMAQ](/human-donors/IGVFDO0698ZMAQ/) has in progress subobject phenotypic feature [04422160-4b28-4f05-81b5-5176e3d6f0fe](/phenotypic-features/04422160-4b28-4f05-81b5-5176e3d6f0fe/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0698ZMAQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [a0a18d18-51af-4fbc-9a8c-baa6f6b720cd](/phenotypic-features/a0a18d18-51af-4fbc-9a8c-baa6f6b720cd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [c2f14d65-c7f8-46d1-8093-818906473518](/phenotypic-features/c2f14d65-c7f8-46d1-8093-818906473518/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [2c783c74-fa89-4766-b218-3e0da350c6da](/phenotypic-features/2c783c74-fa89-4766-b218-3e0da350c6da/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [a393f393-5482-4671-b57c-fe8bfe6e8927](/phenotypic-features/a393f393-5482-4671-b57c-fe8bfe6e8927/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [48e0e9c9-7759-4913-8219-2471979d793e](/phenotypic-features/48e0e9c9-7759-4913-8219-2471979d793e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [5206796d-df44-42d5-a495-92cfc4ef55c6](/phenotypic-features/5206796d-df44-42d5-a495-92cfc4ef55c6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [1ef24011-d1f8-48ff-9e1f-555e57610cd6](/phenotypic-features/1ef24011-d1f8-48ff-9e1f-555e57610cd6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [d0628ba8-dcc8-4c05-bf8e-08dbbb919b2f](/phenotypic-features/d0628ba8-dcc8-4c05-bf8e-08dbbb919b2f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [5df41812-ca61-438a-8942-0827a98215bf](/phenotypic-features/5df41812-ca61-438a-8942-0827a98215bf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [46b3e3ac-e90e-4f3c-8941-5af5fceb9b99](/phenotypic-features/46b3e3ac-e90e-4f3c-8941-5af5fceb9b99/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [ab0c4c39-15a5-415a-891b-05411b5bdfc6](/phenotypic-features/ab0c4c39-15a5-415a-891b-05411b5bdfc6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [eb56d44e-c3b9-4e22-aff7-d12c6ac5fa85](/phenotypic-features/eb56d44e-c3b9-4e22-aff7-d12c6ac5fa85/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4170HAEN](/human-donors/IGVFDO4170HAEN/) has in progress subobject phenotypic feature [73e45a6f-b113-48dc-b388-d74a2ffb2266](/phenotypic-features/73e45a6f-b113-48dc-b388-d74a2ffb2266/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4170HAEN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4170HAEN](/human-donors/IGVFDO4170HAEN/) has in progress subobject phenotypic feature [66fe5873-8396-48ca-996e-7fae115d714b](/phenotypic-features/66fe5873-8396-48ca-996e-7fae115d714b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4170HAEN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4170HAEN](/human-donors/IGVFDO4170HAEN/) has in progress subobject phenotypic feature [2f322a5f-1431-487e-8ca5-7646bb63ac0b](/phenotypic-features/2f322a5f-1431-487e-8ca5-7646bb63ac0b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4170HAEN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4170HAEN](/human-donors/IGVFDO4170HAEN/) has in progress subobject phenotypic feature [aa4cf396-805f-4d46-a35a-3f5592ddc346](/phenotypic-features/aa4cf396-805f-4d46-a35a-3f5592ddc346/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4170HAEN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4170HAEN](/human-donors/IGVFDO4170HAEN/) has in progress subobject phenotypic feature [18594154-e391-440a-8a78-4125804a3c04](/phenotypic-features/18594154-e391-440a-8a78-4125804a3c04/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4170HAEN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [5ec82856-d387-4727-9473-c60628ddce27](/phenotypic-features/5ec82856-d387-4727-9473-c60628ddce27/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [a945aea6-1bca-4a51-a030-e44b27e81d2a](/phenotypic-features/a945aea6-1bca-4a51-a030-e44b27e81d2a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [fd6110d1-a29e-4225-a5e6-27a7614bcdd7](/phenotypic-features/fd6110d1-a29e-4225-a5e6-27a7614bcdd7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [66e32efb-7f85-4402-a04c-fece8128ee8e](/phenotypic-features/66e32efb-7f85-4402-a04c-fece8128ee8e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [0cd59ebe-1db1-4f78-94b0-874fcf8fe239](/phenotypic-features/0cd59ebe-1db1-4f78-94b0-874fcf8fe239/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [42c6269c-25ee-4326-b51c-086f9665bf75](/phenotypic-features/42c6269c-25ee-4326-b51c-086f9665bf75/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [05b2e6f0-0942-4a97-ba30-ab604675cecf](/phenotypic-features/05b2e6f0-0942-4a97-ba30-ab604675cecf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [3190b852-4196-43c9-9da6-03869014b3bb](/phenotypic-features/3190b852-4196-43c9-9da6-03869014b3bb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [52075c15-8fbc-43f4-8ea7-daca38913ca8](/phenotypic-features/52075c15-8fbc-43f4-8ea7-daca38913ca8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [9a07089a-e55f-4366-921e-fc24aeb5118a](/phenotypic-features/9a07089a-e55f-4366-921e-fc24aeb5118a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [f3c96e1e-630f-47c2-8e2d-5c9ba8d18598](/phenotypic-features/f3c96e1e-630f-47c2-8e2d-5c9ba8d18598/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [6398d5ed-9d64-42a5-bf1a-e4d9e52057b5](/phenotypic-features/6398d5ed-9d64-42a5-bf1a-e4d9e52057b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [b52127d9-b46f-4047-b2f5-3cd75d0933f0](/phenotypic-features/b52127d9-b46f-4047-b2f5-3cd75d0933f0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [72f27db2-904b-4967-b919-f7c013e2eec8](/phenotypic-features/72f27db2-904b-4967-b919-f7c013e2eec8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [30f0b56e-d6b3-43e1-8a81-6a16bb0e28ee](/phenotypic-features/30f0b56e-d6b3-43e1-8a81-6a16bb0e28ee/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0966KXTA](/human-donors/IGVFDO0966KXTA/) has in progress subobject phenotypic feature [6a401974-b8df-482a-b734-fab7683a6f39](/phenotypic-features/6a401974-b8df-482a-b734-fab7683a6f39/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0966KXTA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0966KXTA](/human-donors/IGVFDO0966KXTA/) has in progress subobject phenotypic feature [d72f23fa-592d-4693-ab03-1160f89e3d5b](/phenotypic-features/d72f23fa-592d-4693-ab03-1160f89e3d5b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0966KXTA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0966KXTA](/human-donors/IGVFDO0966KXTA/) has in progress subobject phenotypic feature [a5b8945b-e2c3-49f2-96d9-e9c91bd1fe1c](/phenotypic-features/a5b8945b-e2c3-49f2-96d9-e9c91bd1fe1c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0966KXTA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0966KXTA](/human-donors/IGVFDO0966KXTA/) has in progress subobject phenotypic feature [ae18045e-aea2-45bb-b765-de3f2b965b59](/phenotypic-features/ae18045e-aea2-45bb-b765-de3f2b965b59/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0966KXTA/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS7843JHRO](/measurement-sets/IGVFDS7843JHRO/) has sequence file(s): [IGVFFI9672RNHU](/sequence-files/IGVFFI9672RNHU/), [IGVFFI1911YGJB](/sequence-files/IGVFFI1911YGJB/), [IGVFFI4755YYDE](/sequence-files/IGVFFI4755YYDE/), [IGVFFI9252WWBO](/sequence-files/IGVFFI9252WWBO/), [IGVFFI2583BXTG](/sequence-files/IGVFFI2583BXTG/), [IGVFFI9242BPPF](/sequence-files/IGVFFI9242BPPF/), [IGVFFI8291KQPU](/sequence-files/IGVFFI8291KQPU/), [IGVFFI9999NLEI](/sequence-files/IGVFFI9999NLEI/), [IGVFFI6752ZGSQ](/sequence-files/IGVFFI6752ZGSQ/), [IGVFFI6019IWVD](/sequence-files/IGVFFI6019IWVD/), [IGVFFI1179HRRF](/sequence-files/IGVFFI1179HRRF/), [IGVFFI2446CVAE](/sequence-files/IGVFFI2446CVAE/), [IGVFFI1202RFLG](/sequence-files/IGVFFI1202RFLG/), [IGVFFI0850AVUS](/sequence-files/IGVFFI0850AVUS/), [IGVFFI8756TNIE](/sequence-files/IGVFFI8756TNIE/), [IGVFFI0733YGEM](/sequence-files/IGVFFI0733YGEM/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS7843JHRO/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS7843JHRO](/measurement-sets/IGVFDS7843JHRO/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS7843JHRO/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS7843JHRO](/measurement-sets/IGVFDS7843JHRO/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS7843JHRO/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T19:46:04.084895+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO9211DWXZ/",
"accession": "IGVFDO9211DWXZ",
"aliases": [
"igvf:corces_donor_BANN1352"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3471KCPD/",
"accession": "IGVFDO3471KCPD",
"aliases": [
"igvf:corces_donor_BANN1647"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8344LUQZ/",
"accession": "IGVFDO8344LUQZ",
"aliases": [
"igvf:corces_donor_BANN0621"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4170HAEN/",
"accession": "IGVFDO4170HAEN",
"aliases": [
"igvf:corces_donor_BANN1864"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8458OKEW/",
"accession": "IGVFDO8458OKEW",
"aliases": [
"igvf:corces_donor_BANN1623"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1469WVVS/",
"accession": "IGVFDO1469WVVS",
"aliases": [
"igvf:corces_donor_BANN1063"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3795BUZW/",
"accession": "IGVFDO3795BUZW",
"aliases": [
"igvf:corces_donor_BANN1311"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4273OHGB/",
"accession": "IGVFDO4273OHGB",
"aliases": [
"igvf:corces_donor_BANN0322"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8155MCUV/",
"accession": "IGVFDO8155MCUV",
"aliases": [
"igvf:corces_donor_BANN0437"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5228HTJC/",
"accession": "IGVFDO5228HTJC",
"aliases": [
"igvf:corces_donor_BANN1839"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0966KXTA/",
"accession": "IGVFDO0966KXTA",
"aliases": [
"igvf:corces_donor_BANN0138"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0698ZMAQ/",
"accession": "IGVFDO0698ZMAQ",
"aliases": [
"igvf:corces_donor_BANN1569"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI9672RNHU/",
"accession": "IGVFFI9672RNHU",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L003_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:56.947322+00:00",
"file_format": "fastq",
"file_size": 2175313289,
"href": "/sequence-files/IGVFFI9672RNHU/@@download/IGVFFI9672RNHU.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/a65b0691-8c71-4872-98c1-992cb2ccb529/IGVFFI9672RNHU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L003_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1911YGJB/",
"accession": "IGVFFI1911YGJB",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L004_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:58.897863+00:00",
"file_format": "fastq",
"file_size": 531280490,
"href": "/sequence-files/IGVFFI1911YGJB/@@download/IGVFFI1911YGJB.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/e357cb32-40fa-4c02-ae05-6ce2648bba7c/IGVFFI1911YGJB.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L004_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4755YYDE/",
"accession": "IGVFFI4755YYDE",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L004_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:28:02.172439+00:00",
"file_format": "fastq",
"file_size": 2174524990,
"href": "/sequence-files/IGVFFI4755YYDE/@@download/IGVFFI4755YYDE.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/acac895e-fd81-45ed-9be9-85253605f2ca/IGVFFI4755YYDE.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L004_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9252WWBO/",
"accession": "IGVFFI9252WWBO",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L001_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:28.602643+00:00",
"file_format": "fastq",
"file_size": 537419125,
"href": "/sequence-files/IGVFFI9252WWBO/@@download/IGVFFI9252WWBO.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/53b967d4-0ffa-44e7-b038-38a6a59a10b7/IGVFFI9252WWBO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L001_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2583BXTG/",
"accession": "IGVFFI2583BXTG",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L004_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:28:07.716213+00:00",
"file_format": "fastq",
"file_size": 2147347104,
"href": "/sequence-files/IGVFFI2583BXTG/@@download/IGVFFI2583BXTG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/5da56c7b-2acb-43d2-b5c5-20b67685d150/IGVFFI2583BXTG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L004_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9242BPPF/",
"accession": "IGVFFI9242BPPF",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L001_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:33.611481+00:00",
"file_format": "fastq",
"file_size": 1195834015,
"href": "/sequence-files/IGVFFI9242BPPF/@@download/IGVFFI9242BPPF.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/2306ec14-9cfc-48b5-8881-68da000b4590/IGVFFI9242BPPF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L001_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8291KQPU/",
"accession": "IGVFFI8291KQPU",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L001_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:36.800942+00:00",
"file_format": "fastq",
"file_size": 2154583194,
"href": "/sequence-files/IGVFFI8291KQPU/@@download/IGVFFI8291KQPU.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/6ec19428-39f9-4171-a88a-c395850f2d0f/IGVFFI8291KQPU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L001_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9999NLEI/",
"accession": "IGVFFI9999NLEI",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L002_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:47.590845+00:00",
"file_format": "fastq",
"file_size": 2192095202,
"href": "/sequence-files/IGVFFI9999NLEI/@@download/IGVFFI9999NLEI.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/ff50920e-4865-4bcc-952e-64fc5dc0d008/IGVFFI9999NLEI.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L002_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6752ZGSQ/",
"accession": "IGVFFI6752ZGSQ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L003_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:54.412757+00:00",
"file_format": "fastq",
"file_size": 1203048086,
"href": "/sequence-files/IGVFFI6752ZGSQ/@@download/IGVFFI6752ZGSQ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/373c749a-9f5b-4bb3-b64a-7f8dbb4e3dd4/IGVFFI6752ZGSQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L003_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6019IWVD/",
"accession": "IGVFFI6019IWVD",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L002_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:44.515751+00:00",
"file_format": "fastq",
"file_size": 1215811682,
"href": "/sequence-files/IGVFFI6019IWVD/@@download/IGVFFI6019IWVD.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/3cbcb44d-d4c5-41c0-8997-cd0c83dec023/IGVFFI6019IWVD.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L002_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1179HRRF/",
"accession": "IGVFFI1179HRRF",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L003_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:52.338446+00:00",
"file_format": "fastq",
"file_size": 2203473642,
"href": "/sequence-files/IGVFFI1179HRRF/@@download/IGVFFI1179HRRF.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/a56a18f4-13bb-41a9-b226-247f7667b667/IGVFFI1179HRRF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L003_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2446CVAE/",
"accession": "IGVFFI2446CVAE",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L004_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:28:05.321275+00:00",
"file_format": "fastq",
"file_size": 1183968715,
"href": "/sequence-files/IGVFFI2446CVAE/@@download/IGVFFI2446CVAE.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/f841a293-22b1-49fd-8ce7-b7a530f42366/IGVFFI2446CVAE.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L004_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1202RFLG/",
"accession": "IGVFFI1202RFLG",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L002_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:39.219067+00:00",
"file_format": "fastq",
"file_size": 546229597,
"href": "/sequence-files/IGVFFI1202RFLG/@@download/IGVFFI1202RFLG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/fd37ba67-8554-4e38-a7ec-a3077c7161f4/IGVFFI1202RFLG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L002_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0850AVUS/",
"accession": "IGVFFI0850AVUS",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L003_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:50.153131+00:00",
"file_format": "fastq",
"file_size": 540069158,
"href": "/sequence-files/IGVFFI0850AVUS/@@download/IGVFFI0850AVUS.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/0e6eee12-8573-4e17-9610-57456b09e7b1/IGVFFI0850AVUS.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L003_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8756TNIE/",
"accession": "IGVFFI8756TNIE",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L001_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:31.074045+00:00",
"file_format": "fastq",
"file_size": 2179925453,
"href": "/sequence-files/IGVFFI8756TNIE/@@download/IGVFFI8756TNIE.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/7843fc5d-1f0e-4852-a125-8d6fd5d52758/IGVFFI8756TNIE.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L001_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0733YGEM/",
"accession": "IGVFFI0733YGEM",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X041_G4_P041_L002_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:27:41.763855+00:00",
"file_format": "fastq",
"file_size": 2219464997,
"href": "/sequence-files/IGVFFI0733YGEM/@@download/IGVFFI0733YGEM.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/bc024220-e4ad-41b4-87b3-5d170740d35b/IGVFFI0733YGEM.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X041_G4_L004_P041_S14_L002_R1_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI7587TJLC/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS7314VGYF/",
"accession": "IGVFDS7314VGYF",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM0728SZZR/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM0728SZZR",
"aliases": [
"igvf:corces_multiplexedSample_X041_G4"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_2377/",
"status": "in progress",
"term_name": "multiple sclerosis"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
},
{
"@id": "/phenotype-terms/MONDO_0004975/",
"status": "released",
"term_name": "Alzheimer disease"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 72 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; Homo sapiens (female, 82 years) substantia nigra tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T03:27:28.602643+00:00",
"summary": "single-nucleus ATAC-seq (10x multiome)",
"uuid": "6e04cc34-a874-498b-91cc-f1d985dce9ed"
}