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IGVFDS7682JEPE

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 181)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 453
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

21 items
Read Names
fastq
reads
I1
4074
Barcode index
22523KLT3
437 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4002
Barcode index
22523KLT3
433 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1025
Barcode index
22773CLT3
590 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4074
Read 1
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1025
Read 1
22773CLT3
1.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
983
Read 1
22773CLT3
1.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4038
Read 1
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
941
Read 2
22773CLT3
669 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1067
Read 1
22773CLT3
1.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4038
Read 2
22523KLT3
507 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 181)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 438
Jason Buenrostro, Broad