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INDEXED
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MeasurementSet
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IGVFDS7395LBWF
IGVFDS7395LBWF
released
Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C38_day1
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1075HDIL
fastq
reads
R2
2
Illumina NovaSeq X
6
3.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI1700YKJQ
fastq
reads
R1
1
Illumina NovaSeq X
3
3.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI3891CLVB
fastq
reads
R1
1
Illumina NovaSeq X
1
3.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI4458ZQUU
fastq
reads
R1
1
Illumina NovaSeq X
7
3.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI5083WFLV
fastq
reads
R2
2
Illumina NovaSeq X
1
3.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI6352AIKH
fastq
reads
R1
1
Illumina NovaSeq X
4
3.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI6594BRGV
fastq
reads
R2
2
Illumina NovaSeq X
7
3.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI7287GDVC
fastq
reads
R1
1
Illumina NovaSeq X
8
3.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI7338CNLK
fastq
reads
R1
1
Illumina NovaSeq X
5
3.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI8121WPSC
fastq
reads
R2
2
Illumina NovaSeq X
3
3.5 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM2608HKRV
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO2328XGNY
chongyuan-luo:C38
unspecified
Homo sapiens