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INDEXED
Home
/
MeasurementSet
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IGVFDS7377KJJR
IGVFDS7377KJJR
released
Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 18 days, Homo sapiens
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C29_day18
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1356YEAX
fastq
reads
R1
1
Illumina NovaSeq X
7
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI1748PXEG
fastq
reads
R1
1
Read 1
Illumina NovaSeq X
3
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI1867FAQY
fastq
reads
R2
2
Illumina NovaSeq X
6
2.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI2320PDGL
fastq
reads
R2
2
Illumina NovaSeq X
3
2.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI2744IEKV
fastq
reads
R2
2
Read 2
Illumina NovaSeq X
5
2.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI3036XZRW
fastq
reads
R1
1
Illumina NovaSeq X
5
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI4302TZPT
fastq
reads
R2
2
Illumina NovaSeq X
4
2.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI6041VAMH
fastq
reads
R2
2
Read 2
Illumina NovaSeq X
1
2.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI6508NCXG
fastq
reads
R1
1
Illumina NovaSeq X
8
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI6726KXLI
fastq
reads
R2
2
Read 2
Illumina NovaSeq X
8
2.5 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM5419TLSK
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 18 days, Homo sapiens
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO3754NCBP
chongyuan-luo:C29
unspecified
Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA