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IGVFDS7186NAJU

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File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (female, 27.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples
Protocols
Aliases
jimmie-ye:XX15-SC1_snRNA
Attribution
Jimmie Ye, UCSF

Sequencing Results (Illumina)

12 items
Read Names
fastq
reads
I2
210
1.5 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
210
Read 1
7.2 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
209
Read 2
11 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
210
1.7 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
208
Read 1
7.4 GB
Jimmie Ye, UCSF
validated
fastq
reads
I2
208
1.5 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
210
Read 2
11 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
209
Read 1
7.3 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
208
1.7 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
209
1.7 GB
Jimmie Ye, UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 27.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Donors

20 items
Aliases
  • jimmie-ye:donor_355
female
Homo sapiens
  • jimmie-ye:donor_311
female
Homo sapiens
  • jimmie-ye:donor_271
male
Homo sapiens
  • jimmie-ye:donor_120
female
Homo sapiens
  • jimmie-ye:donor_244
male
Homo sapiens
  • jimmie-ye:donor_266
male
Homo sapiens
  • jimmie-ye:donor_127
male
Homo sapiens
  • jimmie-ye:donor_344
female
Homo sapiens
  • jimmie-ye:donor_117
female
Homo sapiens
  • jimmie-ye:donor_217
male
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • jimmie-ye:XX15-SC1_snATAC
Jimmie Ye, UCSF